RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZNF467Q7Z7K2 595 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-202ENST00000262396 TRERF1Q96PN7 1200 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 HELLSQ9NRZ9 838 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 MTMR10Q9NXD2 777 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 STXBP5LQ9Y2K9 1186 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 MROH7Q68CQ1 1323 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 SYNRGQ9UMZ2 1314 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 FRMPD3Q5JV73 1810 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 ASB14A6NK59 587 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 TLR3O15455 904 aaKnown RBP14.46□□□□□ -0.09
TRAF4-202ENST00000262396 SNAI1O95863 264 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-202ENST00000262396 MFAP1P55081 439 aaKnown RBP14.46□□□□□ -0.09
TRAF4-202ENST00000262396 FPGSQ05932 587 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 SNX17Q15036 470 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 SHHQ15465 462 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 MCMDC2Q4G0Z9 681 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 C1orf53Q5VUE5 145 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 RCSD1Q6JBY9 416 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 NSMFQ6X4W1 530 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 SH3RF1Q7Z6J0 888 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 RNPC3Q96LT9 517 aaKnown RBP14.46□□□□□ -0.09
TRAF4-202ENST00000262396 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 AP5M1Q9H0R1 490 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 RWDD1Q9H446 243 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-202ENST00000262396 CCPG1Q9ULG6 757 aa14.46□□□□□ -0.09
TRAF4-202ENST00000262396 PLIN4Q96Q06 1357 aa14.46□□□□□ -0.1
TRAF4-202ENST00000262396 RLFQ13129 1914 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 DNAJC25-GNG10A0A024R161 153 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 TRIM43BA6NCK2 446 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 ZEB2O60315 1214 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 PDE1AP54750 535 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 SNAP25P60880 206 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 TNFAIP2Q03169 654 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 B4GALNT3Q6L9W6 998 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 CCDC144CPQ8IYA2 1237 aa14.45□□□□□ -0.1
TRAF4-202ENST00000262396 TRIM43Q96BQ3 446 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-202ENST00000262396 SZT2Q5T011 3432 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 COL11A1P12107 1806 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-202ENST00000262396 NMT2O60551 498 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 ADAMTS4O75173 837 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 ASGR1P07306 291 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 CNTN2Q02246 1040 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 C9orf50Q5SZB4 431 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 DCAF4Q8WV16 495 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 MPHOSPH6Q99547 160 aaKnown RBP14.44□□□□□ -0.1
TRAF4-202ENST00000262396 LNPKQ9C0E8 428 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 INCENPQ9NQS7 918 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
TRAF4-202ENST00000262396 A0A0U1RQG5 324 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-202ENST00000262396 TOP1P11387 765 aaKnown RBP14.43□□□□□ -0.1
TRAF4-202ENST00000262396 HAND2P61296 217 aa14.43□□□□□ -0.1
TRAF4-202ENST00000262396 HDAC1Q13547 482 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-202ENST00000262396 VPS53Q5VIR6 699 aa14.43□□□□□ -0.1
TRAF4-202ENST00000262396 FAM109BQ6ICB4 259 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-202ENST00000262396 MFSD6Q6ZSS7 791 aa14.43□□□□□ -0.1
TRAF4-202ENST00000262396 EEPD1Q7L9B9 569 aa14.43□□□□□ -0.1
TRAF4-202ENST00000262396 RNF41Q9H4P4 317 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-202ENST00000262396 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
TRAF4-202ENST00000262396 A1CFQ9NQ94 594 aaKnown RBP14.43□□□□□ -0.1
TRAF4-202ENST00000262396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
TRAF4-202ENST00000262396 ELP1O95163 1332 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 FRMPD2Q68DX3 1309 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-202ENST00000262396 PTPDC1A2A3K4 754 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 KIAA0355O15063 1070 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 ORC4O43929 436 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 PLA2G6O60733 806 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 FGAP02671 866 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 AAMPQ13685 434 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 SYDE2Q5VT97 1194 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 TMEM199Q8N511 208 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 KLHDC9Q8NEP7 349 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 FAM227BQ96M60 508 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 TOX2Q96NM4 488 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 DIAPH3Q9NSV4 1193 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 ADD3Q9UEY8 706 aaKnown RBP14.42□□□□□ -0.1
TRAF4-202ENST00000262396 ANAPC4Q9UJX5 808 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 PNMA2Q9UL42 364 aa14.42□□□□□ -0.1
TRAF4-202ENST00000262396 ZNFX1Q9P2E3 1918 aaKnown RBP14.42□□□□□ -0.1
TRAF4-202ENST00000262396 MYH4Q9Y623 1939 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 DYNC1LI2O43237 492 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-202ENST00000262396 SLC16A2P36021 539 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 GJA9P57773 515 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 SMAD3P84022 425 aaKnown RBP14.41□□□□□ -0.1
TRAF4-202ENST00000262396 BEX3Q00994 111 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 FAAP100Q0VG06 881 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 NMIQ13287 307 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-202ENST00000262396 PPIGQ13427 754 aaKnown RBP eCLIP14.41□□□□□ -0.15e-10■■■□□ 15.3
TRAF4-202ENST00000262396 ALX1Q15699 326 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 KIAA1211Q6ZU35 1233 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 ANKRD33Q7Z3H0 272 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 TLK2Q86UE8 772 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 IL17RBQ9NRM6 502 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
TRAF4-202ENST00000262396 PLXNA1Q9UIW2 1896 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 A0A0D9SFI3 127 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 B4DLN1 442 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 ARVCFO00192 962 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms