RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 SLC40A1Q9NP59 571 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 PIH1D3Q9NQM4 214 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 FAM153AQ9UHL3 310 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 MCAMP43121 646 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 FAM167BQ9BTA0 163 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 LY9Q9HBG7 655 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 PLAAQ9Y263 795 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 KIDINS220Q9ULH0 1771 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 PPP1R3GB7ZBB8 358 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 OPLAHO14841 1288 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 CALRP27797 417 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 PAK2Q13177 524 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 TCIRG1Q13488 830 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 LLGL1Q15334 1064 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 TTMPQ5BVD1 217 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 IFNL3Q8IZI9 196 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 CACNA2D3Q8IZS8 1091 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 TRIM58Q8NG06 486 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 AP1M1Q9BXS5 423 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 VIPAS39Q9H9C1 493 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 NOVA2Q9UNW9 492 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 OVOS2A0A0J9YW53 1432 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 OVOS2Q6IE36 1432 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 PHF20L1A8MW92 1017 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 FMNL1O95466 1100 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 MAP2K1Q02750 393 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 GPKOWQ92917 476 aaPredicted RBP eCLIP17.66■□□□□ 0.423e-7■■■■■ 29.3
PRPF40B-201ENST00000261897 ZKSCAN4Q969J2 545 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 TRIM6Q9C030 488 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 REXO2Q9Y3B8 237 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 HYOU1Q9Y4L1 999 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 RPS6KA5O75582 802 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 DNAAF5Q86Y56 855 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 SLC39A2Q9NP94 309 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 RMND1Q9NWS8 449 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 TBC1D7Q9P0N9 293 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 PPP1R37O75864 691 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 RAPGEF1Q13905 1077 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 TRADDQ15628 312 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 RPGRIP1Q96KN7 1286 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 OSBPL9Q96SU4 736 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
PRPF40B-201ENST00000261897 KCNK3O14649 394 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 CFAP221Q4G0U5 840 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 AKNAD1Q5T1N1 836 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 LBHD1Q9BQE6 289 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 NEURL4Q96JN8 1562 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 MAEAQ7L5Y9 396 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 CCDC170Q8IYT3 715 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 CNOT6LQ96LI5 555 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 UPP2O95045 317 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 ADCY1Q08828 1119 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 SPDL1Q96EA4 605 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 ORAI2Q96SN7 254 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 KRT23Q9C075 422 aa17.65■□□□□ 0.42
PRPF40B-201ENST00000261897 CYP7A1P22680 504 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 GFPT1Q06210 699 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 FAM47AQ5JRC9 791 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 SMIM22K7EJ46 135 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 WNT7AO00755 349 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 CHD1O14646 1710 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 IFNAR1P17181 557 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 CCDC25Q86WR0 208 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 DZIP3Q86Y13 1208 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 PARP9Q8IXQ6 854 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 CRACR2BQ8N4Y2 399 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 TNKSO95271 1327 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 PMS1P54277 932 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 AMPD2Q01433 879 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 ANKLE2Q86XL3 938 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 ZNF622Q969S3 477 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 YIPF3Q9GZM5 350 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 AXIN2Q9Y2T1 843 aa17.64■□□□□ 0.41
PRPF40B-201ENST00000261897 CLSTN1O94985 981 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 ITGA6P23229 1130 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 KCNV2Q8TDN2 545 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 NOX5Q96PH1 765 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 KIF11P52732 1056 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 HEATR3Q7Z4Q2 680 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 DDX17Q92841 729 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 FOXP1Q9H334 677 aaPredicted RBP17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 PCDHA13Q9Y5I0 950 aa17.63■□□□□ 0.41
PRPF40B-201ENST00000261897 SLCO1A2P46721 670 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 DNM2P50570 870 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 DTHD1Q6ZMT9 781 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 ARFGAP2Q8N6H7 521 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 MDM1Q8TC05 714 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 SNX12Q9UMY4 172 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 AARSP49588 968 aaKnown RBP eCLIP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms