RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TCP11X2Q5H9J9 407 aa16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 TMTC3Q6ZXV5 915 aa16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 SH3RF1Q7Z6J0 888 aa16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 MXD3Q9BW11 206 aa16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.19
SFSWAP-201ENST00000261674 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 BMP15O95972 392 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 IL17AQ16552 155 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 CCDC122Q5T0U0 273 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 CPVLQ9H3G5 476 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 CCDC194A0A1B0GVG4 234 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 ATP2C1P98194 919 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 RBM28Q9NW13 759 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 MCM9Q9NXL9 1143 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 PARP1P09874 1014 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 BEND6Q5SZJ8 279 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 RIOK1Q9BRS2 568 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-201ENST00000261674 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 PBX1P40424 430 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 SLC10A5Q5PT55 438 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 C10orf67Q8IYJ2 551 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 MAGEC2Q9UBF1 373 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 GTPBP6O43824 516 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 PRDX5P30044 214 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 PMS1P54277 932 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 RAD51AP2Q09MP3 1159 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 GRAPQ13588 217 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 INF2Q27J81 1249 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 FAM84BQ96KN1 310 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
SFSWAP-201ENST00000261674 MACROD2A1Z1Q3 448 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 EIF3JO75822 258 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 MRPS25P82663 173 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 NPY5RQ15761 445 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 STAG2Q8N3U4 1231 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 VAT1LQ9HCJ6 419 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 ZNF804BA4D1E1 1349 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 ANKRD65E5RJM6 399 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 G3V3G9 751 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 C21orf2O43822 256 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 NDUFA10O95299 355 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 CALM1P0DP23 149 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 CALM2P0DP24 149 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 CALM3P0DP25 149 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 CYP27A1Q02318 531 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 SPAG1Q07617 926 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 CCDC178Q5BJE1 867 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 PLEKHA4Q9H4M7 779 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 KAT14Q9H8E8 782 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 KCNQ5Q9NR82 932 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 IPO7O95373 1038 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 GOLGA8HP0CJ92 632 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 FKBP15Q5T1M5 1219 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 DTHD1Q6ZMT9 781 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 LEKR1Q6ZMV7 388 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 OR8K1Q8NGG5 319 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 DYNLL2Q96FJ2 89 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 RWDD2AQ9UIY3 292 aa16.24■□□□□ 0.19
SFSWAP-201ENST00000261674 B4DLN1 442 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 TFAP4Q01664 338 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 CASP8Q14790 479 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 ZNF658Q5TYW1 1059 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 PSMB7Q99436 277 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 CNTNAP5Q8WYK1 1306 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 MATR3P43243 847 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■■■■□ 20.4
SFSWAP-201ENST00000261674 KLK7P49862 253 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 MECOMQ03112 1051 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 PDXDC2PQ6P474 469 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 BLIDQ8IZY5 108 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 CCDC148Q8NFR7 591 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 JADE2Q9NQC1 790 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 POLLQ9UGP5 575 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 ARHGAP25P42331 645 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 E2F4Q16254 413 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 GSPT2Q8IYD1 628 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 CCDC51Q96ER9 411 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 DBNDD1Q9H9R9 158 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 AGPAT5Q9NUQ2 364 aa16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 LIMA1Q9UHB6 759 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-201ENST00000261674 MYH8P13535 1937 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 FAM205AQ6ZU69 1335 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 MTIF2P46199 727 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 GRIK5Q16478 980 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 ZNF384Q8TF68 577 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 HPS3Q969F9 1004 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 CRNKL1Q9BZJ0 848 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 TMEM60Q9H2L4 133 aa16.22■□□□□ 0.19
SFSWAP-201ENST00000261674 L1RE1Q9UN81 338 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms