RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 IFNAR2P48551 515 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 FAM47AQ5JRC9 791 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 POTEJP0CG39 1038 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 CTNNA2P26232 953 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 HERC4Q5GLZ8 1057 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-201ENST00000261646 ADAT2Q7Z6V5 191 aaKnown RBP17.91■□□□□ 0.46
SREBF1-201ENST00000261646 CCDC65Q8IXS2 484 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 ZNF526Q8TF50 670 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-201ENST00000261646 GPR108Q9NPR9 543 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 GDAQ9Y2T3 454 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 ARID4AP29374 1257 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-201ENST00000261646 TCP11X2Q5H9J9 407 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 EMBQ6PCB8 327 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
SREBF1-201ENST00000261646 H3BQF6 201 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 PHKA1P46020 1223 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 ZBED6P86452 979 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 INF2Q27J81 1249 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 DENND2CQ68D51 928 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 TRIM68Q6AZZ1 485 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 NAP1L3Q99457 506 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-201ENST00000261646 STIM2Q9P246 746 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 RWDD2AQ9UIY3 292 aa17.91■□□□□ 0.46
SREBF1-201ENST00000261646 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 EXOSC10Q01780 885 aaKnown RBP17.9■□□□□ 0.46
SREBF1-201ENST00000261646 NAA35Q5VZE5 725 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 PRM3Q9NNZ6 103 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 MTUS1Q9ULD2 1270 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 FTCDO95954 541 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 LDHCP07864 332 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 ZNF658Q5TYW1 1059 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-201ENST00000261646 ANKRD42Q8N9B4 389 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 SNX29Q8TEQ0 813 aa17.9■□□□□ 0.46
SREBF1-201ENST00000261646 POLR2FP61218 127 aaKnown RBP17.9■□□□□ 0.46
SREBF1-201ENST00000261646 ATP1A1P05023 1023 aaKnown RBP17.89■□□□□ 0.45
SREBF1-201ENST00000261646 GUCY2CP25092 1073 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 ALDH3A1P30838 453 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 GJC1P36383 396 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 RBM5P52756 815 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■□□□ 12.3
SREBF1-201ENST00000261646 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 ERMNQ8TAM6 284 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 PNKPQ96T60 521 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 LSM14BQ9BX40 385 aaKnown RBP17.89■□□□□ 0.45
SREBF1-201ENST00000261646 FLOT1O75955 427 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 EIF4A3P38919 411 aaKnown RBP17.89■□□□□ 0.45
SREBF1-201ENST00000261646 BLIDQ8IZY5 108 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 IQCDQ96DY2 449 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 TUBE1Q9UJT0 475 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 ATP6V0A2Q9Y487 856 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-201ENST00000261646 CORO7P57737 925 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 NONOQ15233 471 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■■■□ 22
SREBF1-201ENST00000261646 BEND6Q5SZJ8 279 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-201ENST00000261646 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 CRACR2BQ8N4Y2 399 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-201ENST00000261646 MMS19Q96T76 1030 aa17.89■□□□□ 0.45
SREBF1-201ENST00000261646 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■■■■ 106.6
SREBF1-201ENST00000261646 PIK3C2BO00750 1634 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 TTC26A0AVF1 554 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 USP17L12C9JPN9 530 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 USP17L21D6R901 530 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 CTNND1O60716 968 aaKnown RBP17.88■□□□□ 0.45
SREBF1-201ENST00000261646 SASH3O75995 380 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.45
SREBF1-201ENST00000261646 MB21D1Q8N884 522 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 CHP1Q99653 195 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 SERPINA10Q9UK55 444 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 FDPSP14324 419 aaKnown RBP17.88■□□□□ 0.45
SREBF1-201ENST00000261646 MXRA7P84157 204 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 TAOK1Q7L7X3 1001 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 RETREG2Q8NC44 543 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 CCDC197Q8NCU1 140 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 RNF26Q9BY78 433 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-201ENST00000261646 NUCKS1Q9H1E3 243 aaKnown RBP17.88■□□□□ 0.45
SREBF1-201ENST00000261646 ESYT3A0FGR9 886 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 CDC27P30260 824 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 STXBP4Q6ZWJ1 553 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 PPFIBP2Q8ND30 876 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 GPKOWQ92917 476 aaPredicted RBP eCLIP17.88■□□□□ 0.453e-6■■□□□ 13.6
SREBF1-201ENST00000261646 LCMT1Q9UIC8 334 aa17.88■□□□□ 0.45
SREBF1-201ENST00000261646 SCG2P13521 617 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 GSTA5Q7RTV2 222 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 ZSCAN10Q96SZ4 725 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-201ENST00000261646 CXorf56Q9H5V9 222 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 TECP42680 631 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 SEL1L2Q5TEA6 688 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 RASGRP4Q8TDF6 673 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 MRRFQ96E11 262 aaKnown RBP17.87■□□□□ 0.45
SREBF1-201ENST00000261646 NOVA2Q9UNW9 492 aaKnown RBP17.87■□□□□ 0.45
SREBF1-201ENST00000261646 TRIM49BA6NDI0 452 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 SPOPO43791 374 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 HIP1RO75146 1068 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 TNFAIP3P21580 790 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 BCAMP50895 628 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 SLC24A3Q9HC58 644 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 SEMA3EO15041 775 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 HS2ST1Q7LGA3 356 aa17.87■□□□□ 0.45
SREBF1-201ENST00000261646 NBPF5PQ86XG9 351 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms