RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ANKRD18AQ8IVF6 992 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 GPKOWQ92917 476 aaPredicted RBP eCLIP17.79■□□□□ 0.448e-6■■■□□ 18.6
LMNB1-201ENST00000261366 ZSCAN10Q96SZ4 725 aaPredicted RBP17.79■□□□□ 0.44
LMNB1-201ENST00000261366 RNF41Q9H4P4 317 aaPredicted RBP17.79■□□□□ 0.44
LMNB1-201ENST00000261366 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 KCPQ6ZWJ8 1503 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 GLI3P10071 1580 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 LGALS16A8MUM7 142 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 NCK2O43639 380 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 MOCS3O95396 460 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 IBSPP21815 317 aaPredicted RBP17.79■□□□□ 0.44
LMNB1-201ENST00000261366 PDCLQ13371 301 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 SEC23AQ15436 765 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 PAPD7Q5XG87 772 aaKnown RBP17.79■□□□□ 0.44
LMNB1-201ENST00000261366 NFRKBQ6P4R8 1299 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 ARL8AQ96BM9 186 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 CAPN6Q9Y6Q1 641 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 KRT83P78385 493 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 NPY5RQ15761 445 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 TYW1BQ6NUM6 668 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 MCM3P25205 808 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 CYLC1P35663 651 aaPredicted RBP17.78■□□□□ 0.44
LMNB1-201ENST00000261366 MNAT1P51948 309 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 CT47A1Q5JQC4 288 aaPredicted RBP17.78■□□□□ 0.44
LMNB1-201ENST00000261366 CSGALNACT2Q8N6G5 542 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 TUBGCP2Q9BSJ2 902 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 PLA2G12BQ9BX93 195 aa17.78■□□□□ 0.44
LMNB1-201ENST00000261366 A0A087WUV0 522 aaPredicted RBP17.77■□□□□ 0.44
LMNB1-201ENST00000261366 GUCY2CP25092 1073 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 ATP2B2Q01814 1243 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 FUT2Q10981 343 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 KIF5AQ12840 1032 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 SRBD1Q8N5C6 995 aaKnown RBP17.77■□□□□ 0.44
LMNB1-201ENST00000261366 SECISBP2LQ93073 1101 aaKnown RBP17.77■□□□□ 0.44
LMNB1-201ENST00000261366 RUFY1Q96T51 708 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 DNAJC7Q99615 494 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 CAPN11Q9UMQ6 739 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 H7C1D1 291 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 MTIF2P46199 727 aaKnown RBP17.77■□□□□ 0.44
LMNB1-201ENST00000261366 NAP1L1P55209 391 aaKnown RBP17.77■□□□□ 0.44
LMNB1-201ENST00000261366 RNASE9P60153 205 aaKnown RBP17.77■□□□□ 0.44
LMNB1-201ENST00000261366 TSEN2Q8NCE0 465 aaKnown RBP17.77■□□□□ 0.44
LMNB1-201ENST00000261366 FAM107BQ9H098 131 aa17.77■□□□□ 0.44
LMNB1-201ENST00000261366 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.43
LMNB1-201ENST00000261366 ESYT3A0FGR9 886 aa17.77■□□□□ 0.43
LMNB1-201ENST00000261366 PRPF3O43395 683 aaKnown RBP17.77■□□□□ 0.43
LMNB1-201ENST00000261366 ZNF512BQ96KM6 892 aaPredicted RBP17.77■□□□□ 0.43
LMNB1-201ENST00000261366 FAM207AQ9NSI2 230 aaPredicted RBP17.77■□□□□ 0.43
LMNB1-201ENST00000261366 SHTN1A0MZ66 631 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 KRT14P02533 472 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 TRIM28Q13263 835 aaKnown RBP17.76■□□□□ 0.43
LMNB1-201ENST00000261366 CCDC178Q5BJE1 867 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 CCDC70Q6NSX1 233 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 ADSSL1Q8N142 457 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 CCDC42Q96M95 316 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 RMND1Q9NWS8 449 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 FAM184BQ9ULE4 1060 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 ZNF263O14978 683 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 STARD3NLO95772 234 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 CCDC181Q5TID7 509 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 RTL9Q8NET4 1388 aa17.76■□□□□ 0.43
LMNB1-201ENST00000261366 SPA17Q15506 151 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 NUP188Q5SRE5 1749 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 MAGEB6P1A0A0J9YX57 407 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 TARSL2A2RTX5 802 aaKnown RBP17.75■□□□□ 0.43
LMNB1-201ENST00000261366 ZSCAN5CA6NGD5 496 aaPredicted RBP17.75■□□□□ 0.43
LMNB1-201ENST00000261366 PDE8AO60658 829 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 BMP15O95972 392 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 TROAPQ12815 778 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 MMS22LQ6ZRQ5 1243 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 IQCA1Q86XH1 822 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 C2CD5Q86YS7 1000 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 IFT81Q8WYA0 676 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 EXOC1Q9NV70 894 aa17.75■□□□□ 0.43
LMNB1-201ENST00000261366 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 H0YHG0 523 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 NDUFAB1O14561 156 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 PSMA7O14818 248 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 BUB1O43683 1085 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 FGFR2P21802 821 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 PPFIA1Q13136 1202 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 ZNF507Q8TCN5 953 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 MS4A14Q96JA4 679 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 TNS2Q63HR2 1409 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 GNAT2P19087 354 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 INPP5BP32019 993 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 CREG2Q8IUH2 290 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 EHBP1Q8NDI1 1231 aa17.74■□□□□ 0.43
LMNB1-201ENST00000261366 CNOT6LQ96LI5 555 aaKnown RBP17.74■□□□□ 0.43
LMNB1-201ENST00000261366 NOC4LQ9BVI4 516 aaKnown RBP17.74■□□□□ 0.43
LMNB1-201ENST00000261366 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
LMNB1-201ENST00000261366 ADAMTS2O95450 1211 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 UBA7P41226 1012 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 GYG1P46976 350 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 APBA1Q02410 837 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms