RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 NOD2Q9HC29 1040 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 MAP3K15Q6ZN16 1313 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 PDIA6Q15084 440 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 CACNA2D3Q8IZS8 1091 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 CCDC42Q96M95 316 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 DNAJC7Q99615 494 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 L3MBTL1Q9Y468 752 aa16.6■□□□□ 0.25
SLC40A1-201ENST00000261024 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 OR2W6PQ8NHA6 318 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 SEC16BQ96JE7 1060 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 PLAAQ9Y263 795 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 LEMD3Q9Y2U8 911 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 MRC1P22897 1456 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 B4DLN1 442 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 ITGB3BPQ13352 177 aaPredicted RBP16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 CPLX4Q7Z7G2 160 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
SLC40A1-201ENST00000261024 MYH10P35580 1976 aa16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 EIF4E1BA6NMX2 242 aaKnown RBP16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 USO1O60763 962 aaKnown RBP16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 PLEKP08567 350 aaPredicted RBP16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 HLTFQ14527 1009 aaKnown RBP eCLIP16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 SAAL1Q96ER3 474 aa16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 SH3GL3Q99963 347 aa16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.25
SLC40A1-201ENST00000261024 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 ATP6V1G2O95670 118 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 IFFO1Q0D2I5 559 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 KCTD19Q17RG1 926 aaPredicted RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 RBM33Q96EV2 1170 aaKnown RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 IFIH1Q9BYX4 1025 aaKnown RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 CAPN11Q9UMQ6 739 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 KLHL33A6NCF5 533 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 PAK2Q13177 524 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 TRADDQ15628 312 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 RRP12Q5JTH9 1297 aaKnown RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 NUP133Q8WUM0 1156 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 WASF1Q92558 559 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 CPSF2Q9P2I0 782 aaKnown RBP16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 HYOU1Q9Y4L1 999 aa16.58■□□□□ 0.24
SLC40A1-201ENST00000261024 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 MST1RQ04912 1400 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 TRIM75PA6NK02 468 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 HMGB1P1B2RPK0 211 aaPredicted RBP16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 YIPF3Q9GZM5 350 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 SLC8A3P57103 927 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 ARFGAP2Q8N6H7 521 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 MAGEC2Q9UBF1 373 aaPredicted RBP16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 PHF20L1A8MW92 1017 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 ZNF174Q15697 407 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 CAPRIN2Q6IMN6 1127 aaKnown RBP16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 RCSD1Q6JBY9 416 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 SPDYE1Q8NFV5 336 aaPredicted RBP16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 CUL5Q93034 780 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 ALS2CR12Q96Q35 445 aa16.57■□□□□ 0.24
SLC40A1-201ENST00000261024 GCOM1H8Y6P7 765 aaPredicted RBP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 FMNL1O95466 1100 aaPredicted RBP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 MYZAPP0CAP1 466 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 TCP1P17987 556 aaKnown RBP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 PIK3R5Q8WYR1 880 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 APPBP2Q92624 585 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 FOXP1Q9H334 677 aaPredicted RBP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 AATFQ9NY61 560 aaKnown RBP eCLIP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 WDR17Q8IZU2 1322 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 BUB1O43683 1085 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 PRCPP42785 496 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 ELF3P78545 371 aaPredicted RBP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 GKAP1Q5VSY0 366 aaPredicted RBP16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 MAGEC3Q8TD91 643 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 TRIM47Q96LD4 638 aa16.56■□□□□ 0.24
SLC40A1-201ENST00000261024 SLIT1O75093 1534 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 LGALS16A8MUM7 142 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 ZAP70P43403 619 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 RABL6Q3YEC7 729 aaPredicted RBP16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 GLE1Q53GS7 698 aaKnown RBP16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 SH3RF1Q7Z6J0 888 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 SPAG5Q96R06 1193 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 GGA2Q9UJY4 613 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 XDHP47989 1333 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 MPHOSPH10O00566 681 aaKnown RBP16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 ZNF263O14978 683 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 ANP32DO95626 131 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 ADORA1P30542 326 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 SEMA3FQ13275 785 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 SNX1Q13596 522 aa16.55■□□□□ 0.24
SLC40A1-201ENST00000261024 SCARF1Q14162 830 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms