RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 DCDC2CA8MYV0 355 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 DUSP11O75319 330 aaKnown RBP15.15■□□□□ 0.02
CSHL1-201ENST00000259003 SNAP25P60880 206 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 ARMCX2Q7L311 632 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
CSHL1-201ENST00000259003 TIFAQ96CG3 184 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 SEC62Q99442 399 aaKnown RBP15.15■□□□□ 0.02
CSHL1-201ENST00000259003 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 MKNK2Q9HBH9 465 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 SLC38A10Q9HBR0 1119 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 BRWD1Q9NSI6 2320 aa15.15■□□□□ 0.02
CSHL1-201ENST00000259003 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.14■□□□□ 0.01
CSHL1-201ENST00000259003 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.14■□□□□ 0.01
CSHL1-201ENST00000259003 CYP2C18P33260 490 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 MFSD5Q6N075 450 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 ZNF365Q70YC5 407 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 FAM126BQ8IXS8 530 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 CCDC144CPQ8IYA2 1237 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 DDRGK1Q96HY6 314 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 LRRCC1Q9C099 1032 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 UPF3AQ9H1J1 476 aaKnown RBP15.14■□□□□ 0.01
CSHL1-201ENST00000259003 PRDM12Q9H4Q4 367 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 INCENPQ9NQS7 918 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 CXXC1Q9P0U4 656 aaPredicted RBP15.14■□□□□ 0.01
CSHL1-201ENST00000259003 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
CSHL1-201ENST00000259003 PTPRSQ13332 1948 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 SOWAHBA6NEL2 793 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 MOXD2PA6NHM9 499 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 ATP2A1O14983 1001 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 GPAA1O43292 621 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 ZBED4O75132 1171 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 CST5P28325 142 aaPredicted RBP15.13■□□□□ 0.01
CSHL1-201ENST00000259003 COPB2P35606 906 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 GJA9P57773 515 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 ADGRE1Q14246 886 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 ANKRD35Q8N283 1001 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
CSHL1-201ENST00000259003 NUP133Q8WUM0 1156 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 AGBL1Q96MI9 1066 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 PURBQ96QR8 312 aaKnown RBP15.13■□□□□ 0.01
CSHL1-201ENST00000259003 ECHDC1Q9NTX5 307 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 MTMR4Q9NYA4 1195 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 ZNF536O15090 1300 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 GRIN2DO15399 1336 aa15.13■□□□□ 0.01
CSHL1-201ENST00000259003 TMEM265A0A087WTH1 108 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 ARVCFO00192 962 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 GNASQ5JWF2 1037 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 SLFN13Q68D06 897 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.12■□□□□ 0.01
CSHL1-201ENST00000259003 ZNF467Q7Z7K2 595 aaPredicted RBP15.12■□□□□ 0.01
CSHL1-201ENST00000259003 KBTBD3Q8NAB2 608 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 APPBP2Q92624 585 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 MKL1Q969V6 931 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 GLT1D1Q96MS3 346 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 PDGFCQ9NRA1 345 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 ELP1O95163 1332 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 BDP1A6H8Y1 2624 aa15.12■□□□□ 0.01
CSHL1-201ENST00000259003 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
CSHL1-201ENST00000259003 CD4P01730 458 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 TDO2P48775 406 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 ZSCAN25Q6NSZ9 544 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 CXCL17Q6UXB2 119 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 CCDC129Q6ZRS4 1044 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 FAM133AQ8N9E0 248 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 OTUD7AQ8TE49 926 aaPredicted RBP15.11■□□□□ 0.01
CSHL1-201ENST00000259003 VWCEQ96DN2 955 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 ABHD16BQ9H3Z7 469 aa15.11■□□□□ 0.01
CSHL1-201ENST00000259003 A1CFQ9NQ94 594 aaKnown RBP15.11■□□□□ 0.01
CSHL1-201ENST00000259003 YBX2Q9Y2T7 364 aaKnown RBP15.11■□□□□ 0.01
CSHL1-201ENST00000259003 MYH6P13533 1939 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 A0A0U1RQG5 324 aaPredicted RBP15.1■□□□□ 0.01
CSHL1-201ENST00000259003 TMEM232C9JQI7 657 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 NMT2O60551 498 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 APPP05067 770 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 PPIGQ13427 754 aaKnown RBP eCLIP15.1■□□□□ 0.01
CSHL1-201ENST00000259003 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
CSHL1-201ENST00000259003 MUM1L1Q5H9M0 696 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 EEPD1Q7L9B9 569 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 IFNL3Q8IZI9 196 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 ZNF444Q8N0Y2 327 aaPredicted RBP15.1■□□□□ 0.01
CSHL1-201ENST00000259003 PPP1R13LQ8WUF5 828 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 NKX2-4Q9H2Z4 354 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 FEM1BQ9UK73 627 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
CSHL1-201ENST00000259003 GNEQ9Y223 722 aaKnown RBP15.1■□□□□ 0.01
CSHL1-201ENST00000259003 SCN10AQ9Y5Y9 1956 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 TRANK1O15050 2925 aa15.1■□□□□ 0.01
CSHL1-201ENST00000259003 MYH7BA7E2Y1 1941 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 FOXP2O15409 715 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 MS4A1P11836 297 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 BMP3P12645 472 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 MYOGP15173 224 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 SMPD1P17405 629 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 RABGGTBP53611 331 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 CCL23P55773 120 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 PSMC6P62333 389 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 GIMAP6Q6P9H5 292 aa15.09■□□□□ 0.01
CSHL1-201ENST00000259003 CCDC174Q6PII3 467 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms