RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 PDE4DQ08499 809 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 SREBF2Q12772 1141 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 DCAF17Q5H9S7 520 aaPredicted RBP8.97□□□□□ -0.97
DSG3-201ENST00000257189 SRRM1Q8IYB3 904 aaKnown RBP8.97□□□□□ -0.97
DSG3-201ENST00000257189 STAMBPL1Q96FJ0 436 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.97□□□□□ -0.97
DSG3-201ENST00000257189 HSPA6P17066 643 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 SMTNP53814 917 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 HDAC4P56524 1084 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 CREB3L3Q68CJ9 461 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 CDKL2Q92772 493 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 TMEM87BQ96K49 555 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 PALMDQ9NP74 551 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 STOML1Q9UBI4 398 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 ZNF215Q9UL58 517 aaPredicted RBP8.97□□□□□ -0.97
DSG3-201ENST00000257189 DEXIO95424 95 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 CHGBP05060 677 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 STX1BP61266 288 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 CNPY4Q8N129 248 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 TRIML2Q8N7C3 387 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 FBXO18Q8NFZ0 1043 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 LARP6Q9BRS8 491 aaKnown RBP8.97□□□□□ -0.97
DSG3-201ENST00000257189 VPS16Q9H269 839 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 ERCC6L2Q5T890 1561 aa8.97□□□□□ -0.97
DSG3-201ENST00000257189 ABCC5O15440 1437 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 YTHDC2Q9H6S0 1430 aaKnown RBP8.96□□□□□ -0.97
DSG3-201ENST00000257189 IL15P40933 162 aaPredicted RBP8.96□□□□□ -0.97
DSG3-201ENST00000257189 KPNA2P52292 529 aaKnown RBP8.96□□□□□ -0.97
DSG3-201ENST00000257189 PPP1R2P3Q6NXS1 205 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 USP26Q9BXU7 913 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 TRIM31Q9BZY9 425 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 PDE11AQ9HCR9 933 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 ITSN2Q9NZM3 1697 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 PIK3C2GO75747 1445 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 THAP12O43422 761 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 STRN3Q13033 797 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 MMEL1Q495T6 779 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 PPP2R2CQ9Y2T4 447 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 NFE2L3Q9Y4A8 694 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 NUB1Q9Y5A7 615 aa8.96□□□□□ -0.97
DSG3-201ENST00000257189 NUP153P49790 1475 aaKnown RBP8.96□□□□□ -0.98
DSG3-201ENST00000257189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.96□□□□□ -0.98
DSG3-201ENST00000257189 KRIT1O00522 736 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 KRT5P13647 590 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 HAND2P61296 217 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 TAF12Q16514 161 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 C16orf87Q6PH81 154 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 RAET1EQ8TD07 263 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 POLR3CQ9BUI4 534 aaPredicted RBP8.96□□□□□ -0.98
DSG3-201ENST00000257189 HELLSQ9NRZ9 838 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 DCTN3O75935 186 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 CDR2Q01850 454 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 VAT1LQ9HCJ6 419 aa8.96□□□□□ -0.98
DSG3-201ENST00000257189 HARSP12081 509 aaKnown RBP8.95□□□□□ -0.98
DSG3-201ENST00000257189 KRT4P19013 534 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 CCDC184Q52MB2 194 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 LDHAL6AQ6ZMR3 332 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 PDZD4Q76G19 769 aaPredicted RBP8.95□□□□□ -0.98
DSG3-201ENST00000257189 SCYL3Q8IZE3 742 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 MGARPQ8TDB4 240 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 TCP11Q8WWU5 503 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 ATP6V0A1Q93050 837 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 PPP2R3CQ969Q6 453 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 COA7Q96BR5 231 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 DCTPP1Q9H773 170 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 SPINK5Q9NQ38 1064 aaPredicted RBP8.95□□□□□ -0.98
DSG3-201ENST00000257189 MRFAP1Q9Y605 127 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 N4BP1O75113 896 aaKnown RBP8.95□□□□□ -0.98
DSG3-201ENST00000257189 GPC4O75487 556 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 LCA5Q86VQ0 697 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 TEKT1Q969V4 418 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 TPCN1Q9ULQ1 816 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 KDM5CP41229 1560 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 FRMD3A2A2Y4 597 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 RASSF10A6NK89 507 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 DAPK3O43293 454 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 APOA1P02647 267 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 ATP6V1E1P36543 226 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 DNM2P50570 870 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 RWDD2BP57060 319 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 CSRNP1Q96S65 589 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 SLF1Q9BQI6 1058 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 UPF3AQ9H1J1 476 aaKnown RBP8.95□□□□□ -0.98
DSG3-201ENST00000257189 CFAP73A6NFT4 308 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 RNF113AO15541 343 aaKnown RBP8.95□□□□□ -0.98
DSG3-201ENST00000257189 SERPINB2P05120 415 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 ATP1A2P50993 1020 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 E2F5Q15329 346 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 TMCO4Q5TGY1 634 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 GADL1Q6ZQY3 521 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 RSAD2Q8WXG1 361 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 ABCA5Q8WWZ7 1642 aa8.95□□□□□ -0.98
DSG3-201ENST00000257189 KRT8P05787 483 aa8.94□□□□□ -0.98
DSG3-201ENST00000257189 MCF2P10911 925 aa8.94□□□□□ -0.98
DSG3-201ENST00000257189 DRP2Q13474 957 aa8.94□□□□□ -0.98
DSG3-201ENST00000257189 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
DSG3-201ENST00000257189 BZW2Q9Y6E2 419 aaKnown RBP8.94□□□□□ -0.98
DSG3-201ENST00000257189 KDM5DQ9BY66 1539 aa8.94□□□□□ -0.98
DSG3-201ENST00000257189 CPS1P31327 1500 aa8.94□□□□□ -0.98
DSG3-201ENST00000257189 IBTKQ9P2D0 1353 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms