RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 GLE1Q53GS7 698 aaKnown RBP12.43□□□□□ -0.42
SCO1-201ENST00000255390 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 KHDRBS2Q5VWX1 349 aaKnown RBP12.43□□□□□ -0.42
SCO1-201ENST00000255390 ZNF653Q96CK0 615 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 LSM14BQ9BX40 385 aaKnown RBP12.43□□□□□ -0.42
SCO1-201ENST00000255390 EPHB1P54762 984 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 KRT25Q7Z3Z0 450 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 CHURC1Q8WUH1 139 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
SCO1-201ENST00000255390 LRWD1Q9UFC0 647 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 PCDH11XQ9BZA7 1347 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 PCDH11YQ9BZA8 1340 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 ATL3Q6DD88 541 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 NELFBQ8WX92 580 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 SLC38A10Q9HBR0 1119 aa12.43□□□□□ -0.42
SCO1-201ENST00000255390 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 WDR48Q8TAF3 677 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 SNX19Q92543 992 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 ABHD8Q96I13 439 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 ARMT1Q9H993 441 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 IFT122Q9HBG6 1241 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 TTC41PQ6P2S7 1318 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 REXO1Q8N1G1 1221 aaKnown RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 DDX41Q9UJV9 622 aaKnown RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 SGK1O00141 431 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 AKAP4Q5JQC9 854 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 RASIP1Q5U651 963 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 FIS1Q9Y3D6 152 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 ACEP12821 1306 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 SYNDIG1LA6NDD5 238 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 ESRRBO95718 433 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 INHBAP08476 426 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 MAP2K2P36507 400 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 PPARGP37231 505 aaPredicted RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 XKR9Q5GH70 373 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 U2AF1L4Q8WU68 220 aaKnown RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 TRIM55Q9BYV6 548 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 KCNH3Q9ULD8 1083 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 V9GY48 417 aaPredicted RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 PLCH2O75038 1416 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 EIF4G3O43432 1585 aaKnown RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 PDE1BQ01064 536 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 ALDH1L1O75891 902 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 NDUFAF2Q8N183 169 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 PAWRQ96IZ0 340 aaKnown RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
SCO1-201ENST00000255390 GOLGA5Q8TBA6 731 aa12.42□□□□□ -0.42
SCO1-201ENST00000255390 RPGRIP1Q96KN7 1286 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 PLEKHA4Q9H4M7 779 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 ALAS1P13196 640 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 EEF1DP29692 281 aaKnown RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 NUDCD3Q8IVD9 361 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 TAB3Q8N5C8 712 aaPredicted RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 TGFBRAP1Q8WUH2 860 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 ZC3H12BQ5HYM0 836 aaKnown RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 DNAAF3Q8N9W5 541 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 ANKRD36BP1Q96IX9 119 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 ZRANB2O95218 330 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCO1-201ENST00000255390 HLA-DPA1P20036 260 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 THOC5Q13769 683 aaKnown RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 ATF2P15336 505 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 BFSP1Q12934 665 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 FRA10AC1Q70Z53 315 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 SYNDIG1Q9H7V2 258 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 PDE1AP54750 535 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 CD109Q6YHK3 1445 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 KRIT1O00522 736 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 SERPINI2O75830 405 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 EEF1GP26641 437 aaKnown RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 GUCY2FP51841 1108 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 TFDP1Q14186 410 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 FAM180AQ6UWF9 173 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
SCO1-201ENST00000255390 RIPOR2Q9Y4F9 1068 aa12.41□□□□□ -0.42
SCO1-201ENST00000255390 SNX1Q13596 522 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 EFHD1Q9BUP0 239 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
SCO1-201ENST00000255390 ITGA6P23229 1130 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 RCN2Q14257 317 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 TRMT10CQ7L0Y3 403 aaKnown RBP12.4□□□□□ -0.42
SCO1-201ENST00000255390 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
SCO1-201ENST00000255390 KLC3Q6P597 504 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
SCO1-201ENST00000255390 GPBP1Q86WP2 473 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 C2CD5Q86YS7 1000 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 GSDMAQ96QA5 445 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 ATP2B4P23634 1241 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 YWHAGP61981 247 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCO1-201ENST00000255390 HOMER3Q9NSC5 361 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 ARHGEF37A1IGU5 675 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 RETREG2Q8NC44 543 aa12.4□□□□□ -0.42
SCO1-201ENST00000255390 MEIS3Q99687 375 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms