RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 INTS13Q9NVM9 706 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
SAFB2-201ENST00000252542 HLA-DOAP06340 250 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 PLCG1P19174 1290 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 PRCPP42785 496 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 UBXN2AP68543 259 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 COL23A1Q86Y22 540 aaPredicted RBP16.92■□□□□ 0.3
SAFB2-201ENST00000252542 UBXN4Q92575 508 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 ATP2C1P98194 919 aaPredicted RBP16.92■□□□□ 0.3
SAFB2-201ENST00000252542 SLC35G1Q2M3R5 365 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 C2CD5Q86YS7 1000 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 SLF1Q9BQI6 1058 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 SERPINB13Q9UIV8 391 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
SAFB2-201ENST00000252542 CASQ1P31415 396 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
SAFB2-201ENST00000252542 NPY5RQ15761 445 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 MED15Q96RN5 788 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 TDRD3Q9H7E2 651 aaKnown RBP16.92■□□□□ 0.3
SAFB2-201ENST00000252542 EXOC1Q9NV70 894 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 PKD2L1Q9P0L9 805 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 IMPACTQ9P2X3 320 aa16.92■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 PLCG2P16885 1265 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 SLC1A4P43007 532 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 ACRBPQ8NEB7 543 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 PPP2R2CQ9Y2T4 447 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 RAD17O75943 681 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 BMP15O95972 392 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 TFRCP02786 760 aaKnown RBP16.91■□□□□ 0.3
SAFB2-201ENST00000252542 FCER1AP12319 257 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 STIM1Q13586 685 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 KIF4BQ2VIQ3 1234 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 CCDC84Q86UT8 332 aaPredicted RBP16.91■□□□□ 0.3
SAFB2-201ENST00000252542 CCDC47Q96A33 483 aaKnown RBP16.91■□□□□ 0.3
SAFB2-201ENST00000252542 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
SAFB2-201ENST00000252542 GNA11P29992 359 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 KRT9P35527 623 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 LRWD1Q9UFC0 647 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 GUCA1BQ9UMX6 200 aa16.91■□□□□ 0.3
SAFB2-201ENST00000252542 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
SAFB2-201ENST00000252542 ARID5AQ03989 594 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 AOC3Q16853 763 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 NELFCDQ8IXH7 590 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 CALML4Q96GE6 196 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 SPEF2Q9C093 1822 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 MCM6Q14566 821 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 GRM4Q14833 912 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 SBK1Q52WX2 424 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 ZNF569Q5MCW4 686 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
SAFB2-201ENST00000252542 ENOX1Q8TC92 643 aaKnown RBP16.9■□□□□ 0.3
SAFB2-201ENST00000252542 OSBPL5Q9H0X9 879 aaPredicted RBP16.9■□□□□ 0.3
SAFB2-201ENST00000252542 KCNJ18B7U540 433 aa16.89■□□□□ 0.3
SAFB2-201ENST00000252542 ZSCAN12O43309 604 aa16.89■□□□□ 0.3
SAFB2-201ENST00000252542 C21orf2O43822 256 aa16.89■□□□□ 0.3
SAFB2-201ENST00000252542 NAP1L1P55209 391 aaKnown RBP16.89■□□□□ 0.3
SAFB2-201ENST00000252542 KCNJ12Q14500 433 aa16.89■□□□□ 0.3
SAFB2-201ENST00000252542 CALCRLQ16602 461 aa16.89■□□□□ 0.3
SAFB2-201ENST00000252542 NEK8Q86SG6 692 aa16.89■□□□□ 0.3
SAFB2-201ENST00000252542 SNX29Q8TEQ0 813 aa16.89■□□□□ 0.3
SAFB2-201ENST00000252542 STXBP3O00186 592 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 KRT31Q15323 416 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 WDR24Q96S15 920 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 MTRQ99707 1265 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 OR52Z1P0C646 297 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 MIGA2Q7L4E1 593 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 DISC1Q9NRI5 854 aa16.89■□□□□ 0.29
SAFB2-201ENST00000252542 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.89■□□□□ 0.29
SAFB2-201ENST00000252542 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
SAFB2-201ENST00000252542 ZNF76P36508 570 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 B4DLN1 442 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 PSMA7O14818 248 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 CHMP2AO43633 222 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 PCP11498 1178 aaKnown RBP16.88■□□□□ 0.29
SAFB2-201ENST00000252542 HOXA13P31271 388 aaPredicted RBP16.88■□□□□ 0.29
SAFB2-201ENST00000252542 ADCY7P51828 1080 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 PMS1P54277 932 aaKnown RBP16.88■□□□□ 0.29
SAFB2-201ENST00000252542 BMS1Q14692 1282 aaKnown RBP16.88■□□□□ 0.29
SAFB2-201ENST00000252542 SEPT2Q15019 361 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 TAF3Q5VWG9 929 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 PROM2Q8N271 834 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 TBC1D22AQ8WUA7 517 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 MEIS1O00470 390 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 FXR1P51114 621 aaKnown RBP eCLIP16.88■□□□□ 0.29
SAFB2-201ENST00000252542 SYCP1Q15431 976 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 TMCO3Q6UWJ1 677 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 GSDMAQ96QA5 445 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 PSMB7Q99436 277 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
SAFB2-201ENST00000252542 MMRN2Q9H8L6 949 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms