RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SLC39A2Q9NP94 309 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
SOX9-201ENST00000245479 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
SOX9-201ENST00000245479 ECM2O94769 699 aaPredicted RBP12.85□□□□□ -0.35
SOX9-201ENST00000245479 GNAT2P19087 354 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.85□□□□□ -0.35
SOX9-201ENST00000245479 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 TBC1D8O95759 1140 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
SOX9-201ENST00000245479 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
SOX9-201ENST00000245479 SEPT11Q9NVA2 429 aaKnown RBP12.85□□□□□ -0.35
SOX9-201ENST00000245479 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 RGPD2P0DJD1 1756 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 KIF5BP33176 963 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 TRAPPC3LQ5T215 181 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 MAEAQ7L5Y9 396 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 CABS1Q96KC9 395 aa12.85□□□□□ -0.35
SOX9-201ENST00000245479 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 USH1GQ495M9 461 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 ZNF804BA4D1E1 1349 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 FRMD3A2A2Y4 597 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 BAG3O95817 575 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 PDE4DQ08499 809 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
SOX9-201ENST00000245479 KIAA0825Q8IV33 1275 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 NWD1Q149M9 1564 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 GRIK5Q16478 980 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 LRCH2Q5VUJ6 765 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 C8orf74Q6P047 294 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 JAKMIP2Q96AA8 810 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 VEZTQ9HBM0 779 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 NLRC4Q9NPP4 1024 aa12.84□□□□□ -0.35
SOX9-201ENST00000245479 ADAMTS3O15072 1205 aa12.83□□□□□ -0.35
SOX9-201ENST00000245479 GUCY2CP25092 1073 aa12.83□□□□□ -0.35
SOX9-201ENST00000245479 KCTD16Q68DU8 428 aa12.83□□□□□ -0.35
SOX9-201ENST00000245479 LINC00116Q8NCU8 138 aa12.83□□□□□ -0.35
SOX9-201ENST00000245479 FAM169AQ9Y6X4 670 aa12.83□□□□□ -0.35
SOX9-201ENST00000245479 A6NNZ2 444 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 TUBB8Q3ZCM7 444 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 DCP1AQ9NPI6 582 aaPredicted RBP12.83□□□□□ -0.36
SOX9-201ENST00000245479 PPANQ9NQ55 473 aaKnown RBP12.83□□□□□ -0.36
SOX9-201ENST00000245479 MRFAP1Q9Y605 127 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 E7EVH7 732 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 SRGAP2O75044 1071 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 CAMTA2O94983 1202 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 SCG2P13521 617 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 TAL1P17542 331 aaPredicted RBP12.83□□□□□ -0.36
SOX9-201ENST00000245479 PLCD1P51178 756 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 UBXN2AP68543 259 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 NCAPH2Q6IBW4 605 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 TRIM10Q9UDY6 481 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 LCMT1Q9UIC8 334 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
SOX9-201ENST00000245479 NOP2P46087 812 aaKnown RBP12.82□□□□□ -0.36
SOX9-201ENST00000245479 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 ZNF34Q8IZ26 560 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 TMEM260Q9NX78 707 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 BAIAP2L1Q9UHR4 511 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 MST1RQ04912 1400 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 SMCO2A6NFE2 343 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 BMP6P22004 513 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 RESP18Q5W5W9 173 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 PAGE5Q96GU1 130 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 ARHGAP23Q9P227 1491 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 A0A087X0B3 334 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.82□□□□□ -0.36
SOX9-201ENST00000245479 CHMP2AO43633 222 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 CXCR5P32302 372 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 BTDP43251 543 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 TBC1D8BQ0IIM8 1120 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 LLGL1Q15334 1064 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 NTRK3Q16288 839 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 UBE2SQ16763 222 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
SOX9-201ENST00000245479 CSGALNACT2Q8N6G5 542 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 EYA3Q99504 573 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 ODF2LQ9ULJ1 636 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 ZNF76P36508 570 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
SOX9-201ENST00000245479 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
SOX9-201ENST00000245479 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 RMND1Q9NWS8 449 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 BCS1LQ9Y276 419 aa12.82□□□□□ -0.36
SOX9-201ENST00000245479 PSMA7O14818 248 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 TRIM37O94972 964 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 CALM1P0DP23 149 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 CALM2P0DP24 149 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 CALM3P0DP25 149 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 E2F5Q15329 346 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms