RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 ITGB3BPQ13352 177 aaPredicted RBP10.79□□□□□ -0.68
IRF1-201ENST00000245414 MYBPC3Q14896 1274 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 POSTNQ15063 836 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 GALNT17Q6IS24 598 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 GRAMD1CQ8IYS0 662 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 SPATA4Q8NEY3 305 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 ALDH8A1Q9H2A2 487 aaPredicted RBP10.79□□□□□ -0.68
IRF1-201ENST00000245414 BMP6P22004 513 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 RFC5P40937 340 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 KCNJ2P63252 427 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 KRT83P78385 493 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 PAPD7Q5XG87 772 aaKnown RBP10.79□□□□□ -0.68
IRF1-201ENST00000245414 ELOA2Q8IYF1 753 aaPredicted RBP10.79□□□□□ -0.68
IRF1-201ENST00000245414 RAPGEF5Q92565 580 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 CNKSR1Q969H4 720 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
IRF1-201ENST00000245414 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 TAF1DQ9H5J8 278 aaPredicted RBP10.79□□□□□ -0.68
IRF1-201ENST00000245414 CARMIL3Q8ND23 1372 aa10.79□□□□□ -0.68
IRF1-201ENST00000245414 CETN3O15182 167 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 PPIP5K2O43314 1243 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 SASH1O94885 1247 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 VIMP08670 466 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 CARSP49589 748 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 ALDH5A1P51649 535 aaPredicted RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 RIPK1Q13546 671 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 RPS6KC1Q96S38 1066 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 PHAXQ9H814 394 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 ARHGEF10LQ9HCE6 1279 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 CTNND1O60716 968 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 FAM153BP0C7A2 387 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 KLC1Q07866 573 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 KIF5AQ12840 1032 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 IFI16Q16666 785 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 IMMTQ16891 758 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 FAM153CQ494X1 144 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 OR2W6PQ8NHA6 318 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 PCMTD1Q96MG8 357 aaPredicted RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 PUS7Q96PZ0 661 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 LZTS2Q9BRK4 669 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.78□□□□□ -0.68
IRF1-201ENST00000245414 FAM153AQ9UHL3 310 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 NOVA2Q9UNW9 492 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 A8MUI8 341 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 NQO1P15559 274 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 POLA2Q14181 598 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 SETDB1Q15047 1291 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 TCERG1LQ5VWI1 586 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 SHC4Q6S5L8 630 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 DHX32Q7L7V1 743 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 GBP5Q96PP8 586 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 NDST4Q9H3R1 872 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.78□□□□□ -0.68
IRF1-201ENST00000245414 ZNHIT6Q9NWK9 470 aaKnown RBP10.78□□□□□ -0.68
IRF1-201ENST00000245414 EHD2Q9NZN4 543 aa10.78□□□□□ -0.68
IRF1-201ENST00000245414 IGF2BP3O00425 579 aaKnown RBP eCLIP10.77□□□□□ -0.68
IRF1-201ENST00000245414 HEXIM1O94992 359 aaKnown RBP10.77□□□□□ -0.68
IRF1-201ENST00000245414 GBP1P32455 592 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 CD151P48509 253 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 TUBP50607 506 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 EIF4A2Q14240 407 aaKnown RBP10.77□□□□□ -0.68
IRF1-201ENST00000245414 SLC39A14Q15043 492 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 TSNAXIP1Q2TAA8 658 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 TTC39AQ5SRH9 613 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 ZNF365Q70YC5 407 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 NDNQ99608 321 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 NPHP4O75161 1426 aaPredicted RBP10.77□□□□□ -0.68
IRF1-201ENST00000245414 UBN2Q6ZU65 1347 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 SYNRGQ9UMZ2 1314 aa10.77□□□□□ -0.68
IRF1-201ENST00000245414 POLR2DO15514 142 aaKnown RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 MAP3K13O43283 966 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 FLOT1O75955 427 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 CTNNA1P35221 906 aaKnown RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 DEUP1Q05D60 604 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 ADAM9Q13443 819 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 HDGFL1Q5TGJ6 251 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 MMGT1Q8N4V1 131 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 CAVIN3Q969G5 261 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 ABTB1Q969K4 478 aaPredicted RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 EDC3Q96F86 508 aaKnown RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 ELAC2Q9BQ52 826 aaKnown RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 SELENOSQ9BQE4 189 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 TAB2Q9NYJ8 693 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 ANKIB1Q9P2G1 1089 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 SCOCQ9UIL1 159 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 ZPR1O75312 459 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 TACC1O75410 805 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 FAM200BP0CF97 657 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 STAT6P42226 847 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 SEPT2Q15019 361 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 CACNA2D4Q7Z3S7 1137 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 IQCKQ8N0W5 287 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 WDR66Q8TBY9 1149 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 WHAMMQ8TF30 809 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 UBLCP1Q8WVY7 318 aaPredicted RBP10.77□□□□□ -0.69
IRF1-201ENST00000245414 SYT15Q9BQS2 421 aa10.77□□□□□ -0.69
IRF1-201ENST00000245414 VCX3BQ9H321 246 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms