RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 DPH6Q7L8W6 267 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 METTL16Q86W50 562 aaKnown RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 BLIDQ8IZY5 108 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 KIFC2Q96AC6 838 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 EPSTI1Q96J88 318 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 GSDMAQ96QA5 445 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 IFIH1Q9BYX4 1025 aaKnown RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 CPVLQ9H3G5 476 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 USP31Q70CQ4 1352 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 ABCA9Q8IUA7 1624 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 PRR29P0C7W0 189 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 SCG2P13521 617 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 COL9A3Q14050 684 aaPredicted RBP10.28□□□□□ -0.76
COL21A1-201ENST00000244728 DLGAP5Q15398 846 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 CPLX4Q7Z7G2 160 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 CELF1Q92879 486 aaKnown RBP10.28□□□□□ -0.76
COL21A1-201ENST00000244728 SOS2Q07890 1332 aaPredicted RBP10.28□□□□□ -0.76
COL21A1-201ENST00000244728 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 EIF3CLB5ME19 914 aaKnown RBP10.28□□□□□ -0.76
COL21A1-201ENST00000244728 TBC1D8O95759 1140 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 MMP1P03956 469 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 CETN2P41208 172 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 CALCRLQ16602 461 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 CABP7Q86V35 215 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 EIF3CQ99613 913 aaKnown RBP10.28□□□□□ -0.76
COL21A1-201ENST00000244728 ZNF408Q9H9D4 720 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 FAM207AQ9NSI2 230 aaPredicted RBP10.28□□□□□ -0.76
COL21A1-201ENST00000244728 MYO1AQ9UBC5 1043 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 OVOS2A0A0J9YW53 1432 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 OVOS2Q6IE36 1432 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 C2CD5Q86YS7 1000 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 NUP58Q9BVL2 599 aa10.28□□□□□ -0.76
COL21A1-201ENST00000244728 FOXP1Q9H334 677 aaPredicted RBP10.28□□□□□ -0.76
COL21A1-201ENST00000244728 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.76
COL21A1-201ENST00000244728 CTNNA2P26232 953 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 SLC16A2P36021 539 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 MAGEA9P43362 315 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 TRAF1Q13077 416 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 FRMPD1Q5SYB0 1578 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 KCTD16Q68DU8 428 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 SRLQ86TD4 932 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 REXO1L1PQ8IX06 675 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 CCDC65Q8IXS2 484 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 EFCAB13Q8IY85 973 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 STRBPQ96SI9 672 aaKnown RBP10.27□□□□□ -0.76
COL21A1-201ENST00000244728 MRPL44Q9H9J2 332 aaKnown RBP10.27□□□□□ -0.76
COL21A1-201ENST00000244728 NLRC4Q9NPP4 1024 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 GINS2Q9Y248 185 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 PALLDQ8WX93 1383 aa10.27□□□□□ -0.76
COL21A1-201ENST00000244728 PPFIA4O75335 1185 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 EZRP15311 586 aaKnown RBP10.27□□□□□ -0.77
COL21A1-201ENST00000244728 VSNL1P62760 191 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 MB21D2Q8IYB1 491 aaPredicted RBP10.27□□□□□ -0.77
COL21A1-201ENST00000244728 ANKRD13CQ8N6S4 541 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 ZNF446Q9NWS9 450 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 USP17L3A6NCW0 530 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 USP17L4A6NCW7 530 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 SORBS3O60504 671 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 CYP2D6P10635 497 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 IFNAR1P17181 557 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 PTPREP23469 700 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 MAP2K2P36507 400 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 GUCY2FP51841 1108 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 CACNB3P54284 484 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 TNNC1P63316 161 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 PPP2R5BQ15173 497 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 ICE2Q659A1 982 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 USP17L2Q6R6M4 530 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 USP17L1Q7RTZ2 530 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 KRT25Q7Z3Z0 450 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 TMEM51Q9NW97 253 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 BCS1LQ9Y276 419 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 KIF20BQ96Q89 1820 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 MROH7-TTC4A0A0A0MT08 1334 aa10.27□□□□□ -0.77
COL21A1-201ENST00000244728 A0A087WUV0 522 aaPredicted RBP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 TLDC2A0PJX2 215 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 CCDC169A6NNP5 214 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 ALDH1B1P30837 517 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 SELENOOQ9BVL4 669 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 SRPRBQ9Y5M8 271 aaKnown RBP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 ERVV-1B6SEH8 477 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 H7C1D1 291 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 NDUFA10O95299 355 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 CDC27P30260 824 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 DNM2P50570 870 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 FMR1Q06787 632 aaKnown RBP eCLIP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 KLHL7Q8IXQ5 586 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 SEPT12Q8IYM1 358 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 UBLCP1Q8WVY7 318 aaPredicted RBP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 IL17RAQ96F46 866 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 MYCBPQ99417 103 aaPredicted RBP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 SRGAP2O75044 1071 aa10.26□□□□□ -0.77
COL21A1-201ENST00000244728 RPN1P04843 607 aaKnown RBP10.26□□□□□ -0.77
COL21A1-201ENST00000244728 ATP2B4P23634 1241 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms