RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 INF2Q27J81 1249 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 CRY2Q49AN0 593 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 HEATR3Q7Z4Q2 680 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 TGFBRAP1Q8WUH2 860 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 GOLGA1Q92805 767 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 GNAQP50148 359 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 ST5P78524 1137 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 ZNF569Q5MCW4 686 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 CCDC148Q8NFR7 591 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 RABGGTAQ92696 567 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 QTRT2Q9H974 415 aaKnown RBP16.2■□□□□ 0.18
HIF3A-202ENST00000244303 STX8Q9UNK0 236 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 CCDC66A2RUB6 948 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 GSTO1P78417 241 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-202ENST00000244303 TMTC1Q8IUR5 882 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 AMOTL1Q8IY63 956 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-202ENST00000244303 DAGLBQ8NCG7 672 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
HIF3A-202ENST00000244303 PLIN2Q99541 437 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 BARHL2Q9NY43 387 aa16.2■□□□□ 0.18
HIF3A-202ENST00000244303 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
HIF3A-202ENST00000244303 UBR3Q6ZT12 1888 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 STXBP3O00186 592 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 ABL1P00519 1130 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 UBXN1Q04323 297 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 TRIM14Q14142 442 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 SLC27A3Q5K4L6 730 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 IRF2BP1Q8IU81 584 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 ADSSL1Q8N142 457 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 TMEM47Q9BQJ4 181 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 PARD6BQ9BYG5 372 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 TCP11L1Q9NUJ3 509 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 H7C1D1 291 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 UFL1O94874 794 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 BAG3O95817 575 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
HIF3A-202ENST00000244303 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 NT5C2P49902 561 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 PMS1P54277 932 aaKnown RBP16.19■□□□□ 0.18
HIF3A-202ENST00000244303 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 CYP26C1Q6V0L0 522 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 MAPKAPK5Q8IW41 473 aa16.19■□□□□ 0.18
HIF3A-202ENST00000244303 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
HIF3A-202ENST00000244303 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
HIF3A-202ENST00000244303 PALM3A6NDB9 673 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-202ENST00000244303 KLRC4O43908 158 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 TBC1D8O95759 1140 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 RASA1P20936 1047 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 KRT9P35527 623 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 UBA7P41226 1012 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 PPP4CP60510 307 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 SRGAP1Q7Z6B7 1085 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 SLC35F6Q8N357 371 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 CD209Q9NNX6 404 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 CDC23Q9UJX2 597 aa16.18■□□□□ 0.18
HIF3A-202ENST00000244303 ERICH4A6NGS2 130 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 SASH3O75995 380 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 LDHCP07864 332 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 CHMP4BP1P59074 171 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 KCNB1Q14721 858 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 LRRC15Q8TF66 581 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 CPVLQ9H3G5 476 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 PUF60Q9UHX1 559 aaKnown RBP16.17■□□□□ 0.18
HIF3A-202ENST00000244303 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 ATP8B1O43520 1251 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 TRIM37O94972 964 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 CCSER1Q9C0I3 900 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 KBTBD4Q9NVX7 518 aa16.17■□□□□ 0.18
HIF3A-202ENST00000244303 CTAGE9A4FU28 777 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 KLRF2D3W0D1 207 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 BBOX1O75936 387 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 DDR1Q08345 913 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 CHP1Q99653 195 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 SLF1Q9BQI6 1058 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 LAD1O00515 517 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 RHOBTB3O94955 611 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 ARHGAP25P42331 645 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 MB21D1Q8N884 522 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 RTFDC1Q9BY42 306 aaPredicted RBP16.16■□□□□ 0.18
HIF3A-202ENST00000244303 ARFGAP3Q9NP61 516 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 SNED1Q8TER0 1413 aa16.16■□□□□ 0.18
HIF3A-202ENST00000244303 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
HIF3A-202ENST00000244303 MYL1P05976 194 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 IL1R1P14778 569 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 HOXA10P31260 410 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-202ENST00000244303 PRPHP41219 470 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 NAPAP54920 295 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 STIM1Q13586 685 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 KRT27Q7Z3Y8 459 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 CEP112Q8N8E3 955 aa16.15■□□□□ 0.18
HIF3A-202ENST00000244303 GIMAP8Q8ND71 665 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-202ENST00000244303 TRIM47Q96LD4 638 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms