RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 ENAHQ8N8S7 591 aaPredicted RBP13.2□□□□□ -0.3
SF3B6-201ENST00000233468 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 NEK1Q96PY6 1258 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 PRO3102Q9H379 93 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 VWA5AO00534 786 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 SLC25A27O95847 323 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 PSMA5P28066 241 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 TRIM32Q13049 653 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 IRF5Q13568 498 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 WTAPQ15007 396 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 SHCBP1Q8NEM2 672 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 DIS3LQ8TF46 1054 aaKnown RBP13.19□□□□□ -0.3
SF3B6-201ENST00000233468 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 NUP88Q99567 741 aaPredicted RBP13.19□□□□□ -0.3
SF3B6-201ENST00000233468 ADAMTS5Q9UNA0 930 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 IVNS1ABPQ9Y6Y0 642 aa13.19□□□□□ -0.3
SF3B6-201ENST00000233468 HSPA4P34932 840 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 OAZ1P54368 228 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 PLS1Q14651 629 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 CYB5R4Q7L1T6 521 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 CATIPQ7Z7H3 387 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 MB21D2Q8IYB1 491 aaPredicted RBP13.18□□□□□ -0.3
SF3B6-201ENST00000233468 SOCS4Q8WXH5 440 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 ATG4CQ96DT6 458 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 HTATIP2Q9BUP3 242 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 SPATC1LQ9H0A9 340 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 MROH8Q9H579 483 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 TXNRD2Q9NNW7 524 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 PAK6Q9NQU5 681 aaPredicted RBP13.18□□□□□ -0.3
SF3B6-201ENST00000233468 A0A0C4DFX4 3053 aa13.18□□□□□ -0.3
SF3B6-201ENST00000233468 WDR19Q8NEZ3 1342 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 PRC1O43663 620 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 STRNO43815 780 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
SF3B6-201ENST00000233468 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 PDHBP11177 359 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 STAT3P40763 770 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 STOX1Q6ZVD7 989 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 KCTD1Q719H9 257 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
SF3B6-201ENST00000233468 PLEKHH3Q7Z736 793 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 KCNB2Q92953 911 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 PAWRQ96IZ0 340 aaKnown RBP13.17□□□□□ -0.3
SF3B6-201ENST00000233468 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 TEX13BQ9BXU2 312 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 SCUBE2Q9NQ36 999 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 SLC5A4Q9NY91 659 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 GJD2Q9UKL4 321 aa13.17□□□□□ -0.3
SF3B6-201ENST00000233468 LAMA2P24043 3122 aaKnown RBP13.17□□□□□ -0.3
SF3B6-201ENST00000233468 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 ATP2A1O14983 1001 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 EVI5O60447 810 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 CNMDO75829 334 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 CALM1P0DP23 149 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 CALM2P0DP24 149 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 CALM3P0DP25 149 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 LIFRP42702 1097 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 FGD1P98174 961 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 TMEM132BQ14DG7 1078 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 SEC23AQ15436 765 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 Q3C1V9 767 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 GPR142Q7Z601 462 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 RIOX2Q8IUF8 465 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 TRMT44Q8IYL2 757 aaKnown RBP13.16□□□□□ -0.3
SF3B6-201ENST00000233468 MOV10L1Q9BXT6 1211 aaKnown RBP13.16□□□□□ -0.3
SF3B6-201ENST00000233468 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 SLC38A10Q9HBR0 1119 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 TAF6LQ9Y6J9 622 aa13.16□□□□□ -0.3
SF3B6-201ENST00000233468 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
SF3B6-201ENST00000233468 KIF5BP33176 963 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 RGS2P41220 211 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 CHST3Q7LGC8 479 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 ABRAQ8N0Z2 381 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
SF3B6-201ENST00000233468 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
SF3B6-201ENST00000233468 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
SF3B6-201ENST00000233468 MAP3K14Q99558 947 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms