RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 BCAMP50895 628 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 PMS1P54277 932 aaKnown RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 TUBB2AQ13885 445 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 TRAPPC11Q7Z392 1133 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 SPATA20Q8TB22 786 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 TUBB2BQ9BVA1 445 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 CNNM2Q9H8M5 875 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 ZNHIT6Q9NWK9 470 aaKnown RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 MAGEC2Q9UBF1 373 aaPredicted RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 DMGDHQ9UI17 866 aaKnown RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.12
PCDHB3-201ENST00000231130 ENO4A6NNW6 628 aa15.77■□□□□ 0.12
PCDHB3-201ENST00000231130 MEFVO15553 781 aaPredicted RBP15.77■□□□□ 0.12
PCDHB3-201ENST00000231130 PDE8BO95263 885 aa15.77■□□□□ 0.12
PCDHB3-201ENST00000231130 HERVK_113P62684 666 aa15.77■□□□□ 0.12
PCDHB3-201ENST00000231130 RASGRF1Q13972 1273 aa15.77■□□□□ 0.12
PCDHB3-201ENST00000231130 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.12
PCDHB3-201ENST00000231130 STAT6P42226 847 aa15.77■□□□□ 0.11
PCDHB3-201ENST00000231130 TUBB4BP68371 445 aa15.77■□□□□ 0.11
PCDHB3-201ENST00000231130 SEMA3FQ13275 785 aa15.77■□□□□ 0.11
PCDHB3-201ENST00000231130 FAXDC2Q96IV6 333 aa15.77■□□□□ 0.11
PCDHB3-201ENST00000231130 HAUS4Q9H6D7 363 aa15.77■□□□□ 0.11
PCDHB3-201ENST00000231130 MCM8Q9UJA3 840 aa15.77■□□□□ 0.11
PCDHB3-201ENST00000231130 CCNHP51946 323 aaPredicted RBP15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 CCDC181Q5TID7 509 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 MTRQ99707 1265 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 LRRC1Q9BTT6 524 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 PLEKP08567 350 aaPredicted RBP15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 MCM3P25205 808 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 TBC1D8BQ0IIM8 1120 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 IFIT1BQ5T764 474 aaKnown RBP15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 WDR93Q6P2C0 686 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 RPN1P04843 607 aaKnown RBP15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 CYP7A1P22680 504 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 SNCBQ16143 134 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 IFT81Q8WYA0 676 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 KIF9Q9HAQ2 790 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 LRWD1Q9UFC0 647 aa15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 SOS2Q07890 1332 aaPredicted RBP15.76■□□□□ 0.11
PCDHB3-201ENST00000231130 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 NMT2O60551 498 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 CCDC121Q6ZUS5 278 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 MLXIPQ9HAP2 919 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 STK36Q9NRP7 1315 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 ESYT3A0FGR9 886 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 AGPSO00116 658 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 MTIF2P46199 727 aaKnown RBP15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 SPAG1Q07617 926 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 SPDL1Q96EA4 605 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 IRAK4Q9NWZ3 460 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 NCK2O43639 380 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 SEC24CP53992 1094 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 KIF5AQ12840 1032 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 CCNI2Q6ZMN8 369 aaPredicted RBP15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 MB21D1Q8N884 522 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 STAG1Q8WVM7 1258 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 NHEJ1Q9H9Q4 299 aaPredicted RBP15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 SPATS2LQ9NUQ6 558 aaKnown RBP15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 MYO1AQ9UBC5 1043 aa15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
PCDHB3-201ENST00000231130 ARL8AQ96BM9 186 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 PPANQ9NQ55 473 aaKnown RBP15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 RWDD2AQ9UIY3 292 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 TCRBV5S4A2TA0A5A2 114 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 MOCS3O95396 460 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 GUCY1A3Q02108 690 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 EVX2Q03828 476 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 PTPROQ16827 1216 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 PREPLQ4J6C6 727 aaPredicted RBP15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 WDR59Q6PJI9 974 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 CATIPQ7Z7H3 387 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 VIPAS39Q9H9C1 493 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 BAIAP2L1Q9UHR4 511 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 ASAP1Q9ULH1 1129 aa15.74■□□□□ 0.11
PCDHB3-201ENST00000231130 FAM170AA1A519 330 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 KRT14P02533 472 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 PCCAP05165 728 aaPredicted RBP15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 CYLC1P35663 651 aaPredicted RBP15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 SSR1P43307 286 aaKnown RBP15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 KRT83P78385 493 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 CKAP4Q07065 602 aaKnown RBP15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 SPA17Q15506 151 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 CCDC178Q5BJE1 867 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 NFRKBQ6P4R8 1299 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 HPS3Q969F9 1004 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 CCDC42Q96M95 316 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 FAM207AQ9NSI2 230 aaPredicted RBP15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 OPA1O60313 960 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 HPDP32754 393 aaPredicted RBP15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 PKN1Q16512 942 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 SH3RF1Q7Z6J0 888 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 ARMC2Q8NEN0 867 aa15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
PCDHB3-201ENST00000231130 FERMT2Q96AC1 680 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms