RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 RPS6KA5O75582 802 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 BAG3O95817 575 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 RHBDL3P58872 404 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 SPDYE2Q495Y8 402 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 ISM2Q6H9L7 571 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 LDHDQ86WU2 507 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 GOLGA5Q8TBA6 731 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 MYO1AQ9UBC5 1043 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 PGAP2Q9UHJ9 254 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 CDC23Q9UJX2 597 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 CEP131Q9UPN4 1083 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 ACTN4O43707 911 aaKnown RBP23.22■■□□□ 1.31
SNX3-201ENST00000230085 CAPN2P17655 700 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 PPP4CP60510 307 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 FMR1Q06787 632 aaKnown RBP eCLIP23.22■■□□□ 1.312e-13■■■■□ 25.7
SNX3-201ENST00000230085 LONRF2Q1L5Z9 754 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 RASGRP2Q7LDG7 609 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 SH3RF3Q8TEJ3 882 aaPredicted RBP23.22■■□□□ 1.31
SNX3-201ENST00000230085 DHX58Q96C10 678 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 CCDC34Q96HJ3 373 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 CTAGE1Q96RT6 745 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 VEZTQ9HBM0 779 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 ADGRG1Q9Y653 693 aa23.22■■□□□ 1.31
SNX3-201ENST00000230085 MAGEB6P1A0A0J9YX57 407 aa23.21■■□□□ 1.31
SNX3-201ENST00000230085 TOB1P50616 345 aaPredicted RBP23.21■■□□□ 1.31
SNX3-201ENST00000230085 SSRP1Q08945 709 aaKnown RBP23.21■■□□□ 1.31
SNX3-201ENST00000230085 SAFBQ15424 915 aaKnown RBP eCLIP23.21■■□□□ 1.31
SNX3-201ENST00000230085 MAP1SQ66K74 1059 aaPredicted RBP23.21■■□□□ 1.31
SNX3-201ENST00000230085 MED15Q96RN5 788 aa23.21■■□□□ 1.31
SNX3-201ENST00000230085 RIOK1Q9BRS2 568 aaKnown RBP23.21■■□□□ 1.31
SNX3-201ENST00000230085 CNNM2Q9H8M5 875 aa23.21■■□□□ 1.31
SNX3-201ENST00000230085 CWC15Q9P013 229 aaKnown RBP23.21■■□□□ 1.31
SNX3-201ENST00000230085 GOLGA8AA7E2F4 631 aa23.2■■□□□ 1.3
SNX3-201ENST00000230085 CDKAL1Q5VV42 579 aa23.2■■□□□ 1.3
SNX3-201ENST00000230085 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
SNX3-201ENST00000230085 TCP10L2B9ZVM9 353 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 CHMP4BP1P59074 171 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 RAD51AP2Q09MP3 1159 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 NFIAQ12857 509 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 SPATA1Q5VX52 437 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 BEND6Q5SZJ8 279 aaPredicted RBP23.19■■□□□ 1.3
SNX3-201ENST00000230085 SH3RF1Q7Z6J0 888 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 LCORLQ8N3X6 602 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 ARMT1Q9H993 441 aa23.19■■□□□ 1.3
SNX3-201ENST00000230085 MRPL44Q9H9J2 332 aaKnown RBP23.19■■□□□ 1.3
SNX3-201ENST00000230085 MBD4O95243 580 aa23.18■■□□□ 1.3
SNX3-201ENST00000230085 CDK11BP21127 795 aaKnown RBP23.18■■□□□ 1.3
SNX3-201ENST00000230085 PPP2R5BQ15173 497 aa23.18■■□□□ 1.3
SNX3-201ENST00000230085 DLK2Q6UY11 383 aa23.18■■□□□ 1.3
SNX3-201ENST00000230085 PHKBQ93100 1093 aa23.18■■□□□ 1.3
SNX3-201ENST00000230085 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
SNX3-201ENST00000230085 MYH6P13533 1939 aa23.18■■□□□ 1.3
SNX3-201ENST00000230085 KIF5CO60282 957 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 ERLIN1O75477 346 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 HDXQ7Z353 690 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 TEX11Q8IYF3 940 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 CCDC12Q8WUD4 166 aaPredicted RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 GBP3Q9H0R5 595 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 TMOD2Q9NZR1 351 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 ADD3Q9UEY8 706 aaKnown RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 ADAM21Q9UKJ8 722 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 PITPNM2Q9BZ72 1349 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 POLR3GO15318 223 aaPredicted RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 TOMM70O94826 608 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 PLCG2P16885 1265 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 ADKP55263 362 aaKnown RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 GOLGA8FQ08AF8 430 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 GOLGA8DPQ0D2H9 430 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 TCP10Q12799 353 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 CUL4BQ13620 913 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 ZSCAN26Q16670 478 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 WHAMMP3Q1A5X7 153 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 CHADLQ6NUI6 762 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 KRT26Q7Z3Y9 468 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 CNGA4Q8IV77 575 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 STRBPQ96SI9 672 aaKnown RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 GLIS2Q9BZE0 524 aaPredicted RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 KRT23Q9C075 422 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 ANKZF1Q9H8Y5 726 aa23.17■■□□□ 1.3
SNX3-201ENST00000230085 DDX4Q9NQI0 724 aaKnown RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 FEZ2Q9UHY8 353 aaPredicted RBP23.17■■□□□ 1.3
SNX3-201ENST00000230085 FOXN1O15353 648 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 DEXIO95424 95 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 BMP15O95972 392 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 PICALMQ13492 652 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 TMEM67Q5HYA8 995 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 MICU3Q86XE3 530 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 APOBEC3FQ8IUX4 373 aaKnown RBP23.16■■□□□ 1.3
SNX3-201ENST00000230085 SULF1Q8IWU6 871 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 DIS3L2Q8IYB7 885 aaKnown RBP23.16■■□□□ 1.3
SNX3-201ENST00000230085 TMTC2Q8N394 836 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 PDILTQ8N807 584 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 TGFBRAP1Q8WUH2 860 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 BBXQ8WY36 941 aaPredicted RBP23.16■■□□□ 1.3
SNX3-201ENST00000230085 IDI2Q9BXS1 227 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 FAM198AQ9UFP1 575 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 SERTAD1Q9UHV2 236 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 L1RE1Q9UN81 338 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 SLC12A7Q9Y666 1083 aa23.16■■□□□ 1.3
SNX3-201ENST00000230085 CCDC196A0A1B0GTZ2 297 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms