RNA–Protein interactions for RNA: ENST00000227157.8

LDHA-201, Transcript of lactate dehydrogenase A, humanhuman

TSL 3 BASIC

Gene LDHA, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-201ENST00000227157 NCOA5Q9HCD5 579 aaKnown RBP9.4□□□□□ -0.9
LDHA-201ENST00000227157 RAVER2Q9HCJ3 691 aaKnown RBP9.4□□□□□ -0.9
LDHA-201ENST00000227157 HOMER2Q9NSB8 354 aa9.4□□□□□ -0.9
LDHA-201ENST00000227157 MAD2L2Q9UI95 211 aa9.4□□□□□ -0.9
LDHA-201ENST00000227157 SLC12A7Q9Y666 1083 aa9.4□□□□□ -0.9
LDHA-201ENST00000227157 MCM3APO60318 1980 aa9.4□□□□□ -0.9
LDHA-201ENST00000227157 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 GPR25O00155 361 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 PARP1P09874 1014 aaKnown RBP9.4□□□□□ -0.91
LDHA-201ENST00000227157 SNHG28P0DPA3 235 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 CDC27P30260 824 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 TMEM132BQ14DG7 1078 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 WDR78Q5VTH9 848 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 C17orf99Q6UX52 265 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 CATIPQ7Z7H3 387 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 HOMER1Q86YM7 354 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 TBC1D32Q96NH3 1257 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 YY1AP1Q9H869 796 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 EFCC1Q9HA90 598 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 UPF2Q9HAU5 1272 aaKnown RBP9.4□□□□□ -0.91
LDHA-201ENST00000227157 PPP1R9AQ9ULJ8 1098 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 PRR12Q9ULL5 1215 aa9.4□□□□□ -0.91
LDHA-201ENST00000227157 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 VWA5AO00534 786 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 EPB41L2O43491 1005 aaKnown RBP9.39□□□□□ -0.91
LDHA-201ENST00000227157 CYTH3O43739 400 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 LIFRP42702 1097 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
LDHA-201ENST00000227157 PABPC4Q13310 644 aaKnown RBP eCLIP9.39□□□□□ -0.911e-323■■■■■ 38.8
LDHA-201ENST00000227157 DCAF4Q8WV16 495 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 AGBL1Q96MI9 1066 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 PNMA3Q9UL41 463 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 RIPK3Q9Y572 518 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 PLXNA1Q9UIW2 1896 aa9.39□□□□□ -0.91
LDHA-201ENST00000227157 BCRP11274 1271 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
LDHA-201ENST00000227157 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 ERVK-24P63145 666 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 GRM4Q14833 912 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 USH1GQ495M9 461 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 CCDC178Q5BJE1 867 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 SYDE2Q5VT97 1194 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 ADGRF4Q8IZF3 695 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 TM6SF1Q9BZW5 370 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 SLC45A1Q9Y2W3 748 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 LCTP09848 1927 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 GOLGA8AA7E2F4 631 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 ZBTB43O43298 467 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 SP3Q02447 781 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 LBX2Q6XYB7 198 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 SGMS1Q86VZ5 419 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 EGFL6Q8IUX8 553 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 EXOC8Q8IYI6 725 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 REM2Q8IYK8 340 aaPredicted RBP9.38□□□□□ -0.91
LDHA-201ENST00000227157 SRBD1Q8N5C6 995 aaKnown RBP9.38□□□□□ -0.91
LDHA-201ENST00000227157 PRPF38AQ8NAV1 312 aaKnown RBP9.38□□□□□ -0.91
LDHA-201ENST00000227157 REPS2Q8NFH8 660 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 PIGSQ96S52 555 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
LDHA-201ENST00000227157 HOXC10Q9NYD6 342 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 FEM1BQ9UK73 627 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 ZNF214Q9UL59 606 aaPredicted RBP9.38□□□□□ -0.91
LDHA-201ENST00000227157 ZNF536O15090 1300 aa9.38□□□□□ -0.91
LDHA-201ENST00000227157 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 KIF20AO95235 890 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 PDIA3P30101 505 aaKnown RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 LACTBP83111 547 aaPredicted RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 CDC37Q16543 378 aaPredicted RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 SNRNP48Q6IEG0 339 aaKnown RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 NCAPG2Q86XI2 1143 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 FANCBQ8NB91 859 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 CTCFLQ8NI51 663 aaPredicted RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 PHKBQ93100 1093 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 MOV10L1Q9BXT6 1211 aaKnown RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 AGXT2Q9BYV1 514 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 SPATC1LQ9H0A9 340 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 JMJD4Q9H9V9 463 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 SAGE1Q9NXZ1 904 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 DDX49Q9Y6V7 483 aaKnown RBP9.37□□□□□ -0.91
LDHA-201ENST00000227157 WDR19Q8NEZ3 1342 aa9.37□□□□□ -0.91
LDHA-201ENST00000227157 PPP1R11O60927 126 aaPredicted RBP9.36□□□□□ -0.91
LDHA-201ENST00000227157 FKTNO75072 461 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 DDAH1O94760 285 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 TPM2P07951 284 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 ALAS1P13196 640 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 ERCC3P19447 782 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 PSMC4P43686 418 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 METAP2P50579 478 aaKnown RBP eCLIP9.36□□□□□ -0.915e-10■■□□□ 11.5
LDHA-201ENST00000227157 ME3Q16798 604 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 RTN1Q16799 776 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 ASPRV1Q53RT3 343 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 SYNE3Q6ZMZ3 975 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
LDHA-201ENST00000227157 GPRC5AQ8NFJ5 357 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms