RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 PDHBP11177 359 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 NBPF12Q5TAG4 269 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 KIFC2Q96AC6 838 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 ZCCHC17Q9NP64 241 aaKnown RBP13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 FAM205CA6NFA0 338 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 SULF1Q8IWU6 871 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 ACER1Q8TDN7 264 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 DNAI1Q9UI46 699 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 CHD4Q14839 1912 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 SMCO2A6NFE2 343 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 PRELPP51888 382 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 GYS2P54840 703 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 TCP11L1Q9NUJ3 509 aa13.28□□□□□ -0.28
TNFAIP1-201ENST00000226225 CCDC148Q8NFR7 591 aa13.27□□□□□ -0.28
TNFAIP1-201ENST00000226225 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.28
TNFAIP1-201ENST00000226225 DCPSQ96C86 337 aaKnown RBP13.27□□□□□ -0.28
TNFAIP1-201ENST00000226225 ZNF446Q9NWS9 450 aa13.27□□□□□ -0.28
TNFAIP1-201ENST00000226225 BIN2Q9UBW5 565 aaPredicted RBP13.27□□□□□ -0.28
TNFAIP1-201ENST00000226225 TRIM75PA6NK02 468 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 USP17L10C9JJH3 530 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 CALML3P27482 149 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 RCAN1P53805 252 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 CCDC12Q8WUD4 166 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 ZNF341Q9BYN7 854 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 GOLPH3LQ9H4A5 285 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 ZSWIM4Q9H7M6 989 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 PICK1Q9NRD5 415 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 CNTNAP5Q8WYK1 1306 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 SKIDA1Q1XH10 827 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 KCNG4Q8TDN1 519 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 WRNIP1Q96S55 665 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 EHD4Q9H223 541 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 C6orf50Q9HD87 102 aa13.27□□□□□ -0.29
TNFAIP1-201ENST00000226225 ASPRV1Q53RT3 343 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 TAF3Q5VWG9 929 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 CCDC174Q6PII3 467 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 DPF2Q92785 391 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 IFNKQ9P0W0 207 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 FZD9O00144 591 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 CYTH3O43739 400 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 TNNT3P45378 269 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 PKN1Q16512 942 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 LETM2Q2VYF4 491 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 BLIDQ8IZY5 108 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 TANGO6Q9C0B7 1094 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 HNRNPH2P55795 449 aaKnown RBP13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 RILPL1Q5EBL4 403 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 GPATCH4Q5T3I0 446 aaKnown RBP13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 WWC2Q6AWC2 1192 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 MNS1Q8NEH6 495 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 ZBTB21Q9ULJ3 1066 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 PCDHA7Q9UN72 937 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 PCDHB6Q9Y5E3 794 aa13.26□□□□□ -0.29
TNFAIP1-201ENST00000226225 NDUFB10O96000 172 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 ASNSP08243 561 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 BMP3P12645 472 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 STX1AQ16623 288 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 INF2Q27J81 1249 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 ADGRF4Q8IZF3 695 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 GPC2Q8N158 579 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 GPRC5DQ9NZD1 345 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 PALM3A6NDB9 673 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 GNA11P29992 359 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 INPP5BP32019 993 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 FAM83BQ5T0W9 1011 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 CLCN6P51797 869 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 JAG1P78504 1218 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 ZNF543Q08ER8 600 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 PCDHA1Q9Y5I3 950 aa13.25□□□□□ -0.29
TNFAIP1-201ENST00000226225 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 CCZ1BP86790 482 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 CCZ1P86791 482 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 SPP2Q13103 211 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 IQCB1Q15051 598 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 LINC00301Q8NCQ3 95 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 GOPCQ9HD26 462 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 CEP131Q9UPN4 1083 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 KRT26Q7Z3Y9 468 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 FCHSD1Q86WN1 690 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 CEP57L1Q8IYX8 460 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 UBXN4Q92575 508 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 GLIS2Q9BZE0 524 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 XPO4Q9C0E2 1151 aaKnown RBP13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms