RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 ARL6IP4Q66PJ3 421 aaKnown RBP16.96■□□□□ 0.31
CCDC47-201ENST00000225726 KRBA2Q6ZNG9 492 aa16.96■□□□□ 0.31
CCDC47-201ENST00000225726 REXO1Q8N1G1 1221 aaKnown RBP16.96■□□□□ 0.31
CCDC47-201ENST00000225726 ANO10Q9NW15 660 aa16.96■□□□□ 0.31
CCDC47-201ENST00000225726 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 BMP3P12645 472 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 CAP2P40123 477 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 KIF4BQ2VIQ3 1234 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 MIGA2Q7L4E1 593 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 C4orf32Q8N8J7 132 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 PDLIM2Q96JY6 352 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 RIC8AQ9NPQ8 531 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 TMX2Q9Y320 296 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 SAMD7Q7Z3H4 446 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 ATAD5Q96QE3 1844 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
CCDC47-201ENST00000225726 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 TEPSINQ96N21 525 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 DNAJC25Q9H1X3 360 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
CCDC47-201ENST00000225726 LMNB1P20700 586 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 LONRF3Q496Y0 759 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 CNNM3Q8NE01 707 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 LAD1O00515 517 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 ORC2Q13416 577 aaPredicted RBP16.94■□□□□ 0.3
CCDC47-201ENST00000225726 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
CCDC47-201ENST00000225726 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 SH2D4AQ9H788 454 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 BIN2Q9UBW5 565 aaPredicted RBP16.94■□□□□ 0.3
CCDC47-201ENST00000225726 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 HOOK1Q9UJC3 728 aaKnown RBP16.94■□□□□ 0.3
CCDC47-201ENST00000225726 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
CCDC47-201ENST00000225726 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
CCDC47-201ENST00000225726 GLT8D2Q9H1C3 349 aa16.94■□□□□ 0.3
CCDC47-201ENST00000225726 H7C1D1 291 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 POLR2DO15514 142 aaKnown RBP16.93■□□□□ 0.3
CCDC47-201ENST00000225726 ZNF165P49910 485 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
CCDC47-201ENST00000225726 NEK8Q86SG6 692 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 ERCC4Q92889 916 aaPredicted RBP16.93■□□□□ 0.3
CCDC47-201ENST00000225726 CUL5Q93034 780 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
CCDC47-201ENST00000225726 ECE1P42892 770 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 ACER1Q8TDN7 264 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 SYMPKQ92797 1274 aaKnown RBP16.93■□□□□ 0.3
CCDC47-201ENST00000225726 SBF1O95248 1867 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 TMEM232C9JQI7 657 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 ASNSP08243 561 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 LONP1P36776 959 aaKnown RBP16.93■□□□□ 0.3
CCDC47-201ENST00000225726 KANK3Q6NY19 840 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 RRAGDQ9NQL2 400 aaPredicted RBP16.93■□□□□ 0.3
CCDC47-201ENST00000225726 GINM1Q9NU53 330 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 TMEM260Q9NX78 707 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
CCDC47-201ENST00000225726 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 MRPL12P52815 198 aaKnown RBP16.92■□□□□ 0.3
CCDC47-201ENST00000225726 C11orf57Q6ZUT1 292 aaPredicted RBP16.92■□□□□ 0.3
CCDC47-201ENST00000225726 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 PRPHP41219 470 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
CCDC47-201ENST00000225726 IKQ13123 557 aaPredicted RBP16.92■□□□□ 0.3
CCDC47-201ENST00000225726 IL17AQ16552 155 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 GPC2Q8N158 579 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 TBCKQ8TEA7 893 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 EPSTI1Q96J88 318 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 SERTAD1Q9UHV2 236 aa16.92■□□□□ 0.3
CCDC47-201ENST00000225726 ASTN2O75129 1339 aaPredicted RBP16.92■□□□□ 0.3
CCDC47-201ENST00000225726 ACTN4O43707 911 aaKnown RBP16.91■□□□□ 0.3
CCDC47-201ENST00000225726 NLRP12P59046 1061 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 LUZP1Q86V48 1076 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 CEP57L1Q8IYX8 460 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
CCDC47-201ENST00000225726 PYM1Q9BRP8 204 aaKnown RBP16.91■□□□□ 0.3
CCDC47-201ENST00000225726 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 PNOCQ13519 176 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 LETM2Q2VYF4 491 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 NAT10Q9H0A0 1025 aaKnown RBP16.91■□□□□ 0.3
CCDC47-201ENST00000225726 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 GPRC5DQ9NZD1 345 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 SCAF8Q9UPN6 1271 aaKnown RBP16.91■□□□□ 0.3
CCDC47-201ENST00000225726 PCDHA1Q9Y5I3 950 aa16.91■□□□□ 0.3
CCDC47-201ENST00000225726 GOLGB1Q14789 3259 aaKnown RBP16.91■□□□□ 0.3
CCDC47-201ENST00000225726 CCNT1O60563 726 aaKnown RBP16.9■□□□□ 0.3
CCDC47-201ENST00000225726 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
CCDC47-201ENST00000225726 CCDC34Q96HJ3 373 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 AMNQ9BXJ7 453 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 KIAA1755Q5JYT7 1200 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 DTHD1Q6ZMT9 781 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 SPICE1Q8N0Z3 855 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 STAT2P52630 851 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 IQCB1Q15051 598 aa16.9■□□□□ 0.3
CCDC47-201ENST00000225726 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms