RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 TTF2Q9UNY4 1162 aaKnown RBP25.06■■□□□ 1.6
CCDC9-201ENST00000221922 STXBP3O00186 592 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 GTPBP6O43824 516 aaPredicted RBP25.06■■□□□ 1.6
CCDC9-201ENST00000221922 CASQ1P31415 396 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 GABPAQ06546 454 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 IL17AQ16552 155 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 CDKAL1Q5VV42 579 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 PDXDC2PQ6P474 469 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 ADAMTS3O15072 1205 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 ZRANB2O95218 330 aaKnown RBP eCLIP25.05■■□□□ 1.6
CCDC9-201ENST00000221922 CD44P16070 742 aaKnown RBP25.05■■□□□ 1.6
CCDC9-201ENST00000221922 SMARCA1P28370 1054 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 PBX1P40424 430 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 GNG11P61952 73 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 ARGLU1Q9NWB6 273 aaPredicted RBP25.05■■□□□ 1.6
CCDC9-201ENST00000221922 PCDHA6Q9UN73 950 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 PCDHA8Q9Y5H6 950 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 MYH8P13535 1937 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 AKR1B15C9JRZ8 316 aaPredicted RBP25.05■■□□□ 1.6
CCDC9-201ENST00000221922 KLRF2D3W0D1 207 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 LAD1O00515 517 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 PARP1P09874 1014 aaKnown RBP25.05■■□□□ 1.6
CCDC9-201ENST00000221922 DOK7Q18PE1 504 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 TYW1BQ6NUM6 668 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 HHIPL2Q6UWX4 724 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 KIFC2Q96AC6 838 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 CEP95Q96GE4 821 aa25.05■■□□□ 1.6
CCDC9-201ENST00000221922 RMND1Q9NWS8 449 aa25.04■■□□□ 1.6
CCDC9-201ENST00000221922 ADD3Q9UEY8 706 aaKnown RBP25.04■■□□□ 1.6
CCDC9-201ENST00000221922 MRFAP1Q9Y605 127 aa25.04■■□□□ 1.6
CCDC9-201ENST00000221922 ADAMTSL1Q8N6G6 1762 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 MYO3BQ8WXR4 1341 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 PPP1R3GB7ZBB8 358 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 F8W031 263 aaPredicted RBP25.03■■□□□ 1.6
CCDC9-201ENST00000221922 TEX33O43247 280 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 STYK1Q6J9G0 422 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 CTAGE1Q96RT6 745 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 NAA15Q9BXJ9 866 aaKnown RBP25.03■■□□□ 1.6
CCDC9-201ENST00000221922 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 RXRBP28702 533 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 FAM193AP78312 1265 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 MSL1Q68DK7 614 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 KLHL10Q6JEL2 608 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 DTHD1Q6ZMT9 781 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 PODNQ7Z5L7 613 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 RASGRP4Q8TDF6 673 aa25.03■■□□□ 1.6
CCDC9-201ENST00000221922 G3V3G9 751 aa25.02■■□□□ 1.6
CCDC9-201ENST00000221922 PNMA6AP0CW24 399 aaPredicted RBP25.02■■□□□ 1.6
CCDC9-201ENST00000221922 CASP1P29466 404 aa25.02■■□□□ 1.6
CCDC9-201ENST00000221922 PICALMQ13492 652 aa25.02■■□□□ 1.6
CCDC9-201ENST00000221922 DCAF8Q5TAQ9 597 aa25.02■■□□□ 1.6
CCDC9-201ENST00000221922 C2CD5Q86YS7 1000 aa25.02■■□□□ 1.6
CCDC9-201ENST00000221922 MTMR7Q9Y216 660 aa25.02■■□□□ 1.6
CCDC9-201ENST00000221922 ZNF771Q7L3S4 317 aaPredicted RBP25.01■■□□□ 1.59
CCDC9-201ENST00000221922 ZNF622Q969S3 477 aaKnown RBP eCLIP25.01■■□□□ 1.591e-6■□□□□ 11.2
CCDC9-201ENST00000221922 TEKT1Q969V4 418 aa25.01■■□□□ 1.59
CCDC9-201ENST00000221922 ZMYND12Q9H0C1 365 aa25.01■■□□□ 1.59
CCDC9-201ENST00000221922 DDX4Q9NQI0 724 aaKnown RBP25.01■■□□□ 1.59
CCDC9-201ENST00000221922 USP40Q9NVE5 1235 aa25.01■■□□□ 1.59
CCDC9-201ENST00000221922 SWAP70Q9UH65 585 aa25.01■■□□□ 1.59
CCDC9-201ENST00000221922 TMCO3Q6UWJ1 677 aa25.01■■□□□ 1.59
CCDC9-201ENST00000221922 KRT25Q7Z3Z0 450 aa25.01■■□□□ 1.59
CCDC9-201ENST00000221922 RRP36Q96EU6 259 aaKnown RBP25.01■■□□□ 1.59
CCDC9-201ENST00000221922 MXD3Q9BW11 206 aa25.01■■□□□ 1.59
CCDC9-201ENST00000221922 CCDC175P0C221 793 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 GOLGA8HP0CJ92 632 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 PRPHP41219 470 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 STAT6P42226 847 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 IGSF22Q8N9C0 903 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 SEC63Q9UGP8 760 aaKnown RBP25■■□□□ 1.59
CCDC9-201ENST00000221922 ZNF646O15015 1829 aaPredicted RBP25■■□□□ 1.59
CCDC9-201ENST00000221922 IGKV6D-41A0A0C4DH26 115 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 H0YIN7 160 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 GNA11P29992 359 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 NAPAP54920 295 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 FKBP1AP62942 108 aaKnown RBP25■■□□□ 1.59
CCDC9-201ENST00000221922 RBL2Q08999 1139 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 INF2Q27J81 1249 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 FILIP1LQ4L180 1135 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 RSRC2Q7L4I2 434 aaKnown RBP25■■□□□ 1.59
CCDC9-201ENST00000221922 PPFIBP1Q86W92 1011 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 DESI2Q9BSY9 194 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 MRPL44Q9H9J2 332 aaKnown RBP25■■□□□ 1.59
CCDC9-201ENST00000221922 C6orf50Q9HD87 102 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 DISC1Q9NRI5 854 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 MTMR4Q9NYA4 1195 aa25■■□□□ 1.59
CCDC9-201ENST00000221922 ATP8B1O43520 1251 aa24.99■■□□□ 1.59
CCDC9-201ENST00000221922 STX17P56962 302 aa24.99■■□□□ 1.59
CCDC9-201ENST00000221922 MTF1Q14872 753 aa24.99■■□□□ 1.59
CCDC9-201ENST00000221922 APOBEC3HQ6NTF7 200 aaKnown RBP24.99■■□□□ 1.59
CCDC9-201ENST00000221922 CDC42EP5Q6NZY7 148 aa24.99■■□□□ 1.59
CCDC9-201ENST00000221922 GPR161Q8N6U8 529 aaKnown RBP24.99■■□□□ 1.59
CCDC9-201ENST00000221922 BLZF1Q9H2G9 400 aa24.99■■□□□ 1.59
CCDC9-201ENST00000221922 SERPINB13Q9UIV8 391 aa24.99■■□□□ 1.59
CCDC9-201ENST00000221922 SLX4Q8IY92 1834 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 SOWAHDA6NJG2 315 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 SCNN1DP51172 638 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 PPP2R3AQ06190 1150 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 SEMA3FQ13275 785 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 ZNF658Q5TYW1 1059 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms