RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 KIFC2Q96AC6 838 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 FMNL1O95466 1100 aaPredicted RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 KRT5P13647 590 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 PSMC4P43686 418 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 LRRC63Q05C16 580 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 TTLL7Q6ZT98 887 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 PIK3AP1Q6ZUJ8 805 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 SKAP1Q86WV1 359 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 FAM96AQ9H5X1 160 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 KRIT1O00522 736 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 CRCPO75575 148 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 RPN1P04843 607 aaKnown RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 RFX1P22670 979 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 STX2P32856 288 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 ZNF174Q15697 407 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 PROM2Q8N271 834 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 CCDC197Q8NCU1 140 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 PSMD1Q99460 953 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 VPS16Q9H269 839 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 EPN1Q9Y6I3 576 aaPredicted RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 HMGB3O15347 200 aaKnown RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 KIF1CO43896 1103 aaKnown RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 FOSP01100 380 aaPredicted RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 GSPT1P15170 499 aaKnown RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 ANXA13P27216 316 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 CTSWP56202 376 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 STX17P56962 302 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 LETM2Q2VYF4 491 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 SDCCAG8Q86SQ7 713 aaPredicted RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 C2CD5Q86YS7 1000 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 BLIDQ8IZY5 108 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 GRID2IPA4D2P6 1211 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 TMEM110-MUSTN1A8MSY1 372 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 GADD45BO75293 160 aaPredicted RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 ZNF131P52739 623 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 ARHGEF18Q6ZSZ5 1173 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 CABP7Q86V35 215 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 ARHGEF2Q92974 986 aaKnown RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 RNF216Q9NWF9 866 aaPredicted RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 B4E1Z4 1266 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 CWF19L2Q2TBE0 894 aaKnown RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 APLFQ8IW19 511 aaPredicted RBP4.84□□□□□ -1.63
CHD9-201ENST00000219084 NCAPGQ9BPX3 1015 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 COL4A3BPQ9Y5P4 624 aa4.84□□□□□ -1.63
CHD9-201ENST00000219084 IPO5O00410 1097 aaKnown RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 TTI1O43156 1089 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 HNRNPCL1O60812 293 aaKnown RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 PPFIA2O75334 1257 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 GCP02774 474 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 OR52Z1P0C646 297 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 ARHGAP4P98171 946 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 PPARAQ07869 468 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 ASPRV1Q53RT3 343 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 ZNF658Q5TYW1 1059 aaPredicted RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 CCDC117Q8IWD4 279 aaPredicted RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 ZNF654Q8IZM8 581 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 KRT12Q99456 494 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 MRGBPQ9NV56 204 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 CTTNBP2NLQ9P2B4 639 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 IPO11Q9UI26 975 aaKnown RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 POLR2BP30876 1174 aaKnown RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 HIBADHP31937 336 aaKnown RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 PDE6CP51160 858 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 PNOCQ13519 176 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 TEX11Q8IYF3 940 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 HACE1Q8IYU2 909 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 SNX29Q8TEQ0 813 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 FAM129AQ9BZQ8 928 aa4.84□□□□□ -1.64
CHD9-201ENST00000219084 ARMCX3Q9UH62 379 aaPredicted RBP4.84□□□□□ -1.64
CHD9-201ENST00000219084 SCG2P13521 617 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 KPNA2P52292 529 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 EIF4A1P60842 406 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 DDB1Q16531 1140 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 BRDTQ58F21 947 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 RINT1Q6NUQ1 792 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 VSTM4Q8IW00 320 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 RASEFQ8IZ41 740 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 TRPC6Q9Y210 931 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CHD4Q14839 1912 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CEP104O60308 925 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ATP2C2O75185 946 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 GARSP41250 739 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 ADCY2Q08462 1091 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ZBTB38Q8NAP3 1195 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 MXD3Q9BW11 206 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ZC3H12CQ9C0D7 883 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 MRPL40Q9NQ50 206 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 SPATS2LQ9NUQ6 558 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 RCOR1Q9UKL0 485 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 PCDHA7Q9UN72 937 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 OVOS2A0A0G2JMS6 1433 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 PGRMC1O00264 195 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 GCNT3O95395 438 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 CUL4BQ13620 913 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 NBPF10Q6P3W6 841 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 MCF2L2Q86YR7 1114 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 ENOX1Q8TC92 643 aaKnown RBP4.83□□□□□ -1.64
CHD9-201ENST00000219084 RSAD2Q8WXG1 361 aa4.83□□□□□ -1.64
CHD9-201ENST00000219084 GFM2Q969S9 779 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms