RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PARK7Q99497 189 aaKnown RBP15.29■□□□□ 0.04
SIX4-201ENST00000216513 SLITRK6Q9H5Y7 841 aa15.29■□□□□ 0.04
SIX4-201ENST00000216513 MED14O60244 1454 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 H7C1W4 665 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
SIX4-201ENST00000216513 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 SLC7A3Q8WY07 619 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 PTCH1Q13635 1447 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 ADD2P35612 726 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 KSR1Q8IVT5 923 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 RABEP2Q9H5N1 569 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 KCNG1Q9UIX4 513 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 CYP2J2P51589 502 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 CDC37Q16543 378 aaPredicted RBP15.28■□□□□ 0.04
SIX4-201ENST00000216513 ATP6V0A1Q93050 837 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 CTAGE1Q96RT6 745 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 MTERF2Q49AM1 385 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 ST7Q9NRC1 585 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 INPP5FQ9Y2H2 1132 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 DDAH1O94760 285 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 SCG2P13521 617 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
SIX4-201ENST00000216513 CPDO75976 1380 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 ELF1P32519 619 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 SNX16P57768 344 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 TGFB2P61812 414 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 TTLL3Q9Y4R7 772 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 SPHKAPQ2M3C7 1700 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.04
SIX4-201ENST00000216513 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 LRMPQ12912 555 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 MRRFQ96E11 262 aaKnown RBP15.27■□□□□ 0.04
SIX4-201ENST00000216513 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
SIX4-201ENST00000216513 CYP2D6P10635 497 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 MTMR2Q13614 643 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 PTPN21Q16825 1174 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.27■□□□□ 0.03
SIX4-201ENST00000216513 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 PLEKHG2Q9H7P9 1386 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 PIK3C2BO00750 1634 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 IQGAP3Q86VI3 1631 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 FOSP01100 380 aaPredicted RBP15.27■□□□□ 0.03
SIX4-201ENST00000216513 PTPROQ16827 1216 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 TLR3O15455 904 aaKnown RBP15.27■□□□□ 0.03
SIX4-201ENST00000216513 SPAG1Q07617 926 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 NEK8Q86SG6 692 aa15.27■□□□□ 0.03
SIX4-201ENST00000216513 GTPBP4Q9BZE4 634 aaKnown RBP15.27■□□□□ 0.03
SIX4-201ENST00000216513 DENND3A2RUS2 1198 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 USP26Q9BXU7 913 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 GPR108Q9NPR9 543 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 FBXO40Q9UH90 709 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 GNAT1P11488 350 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 SKILP12757 684 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 CDHR1Q96JP9 859 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 AGTPBP1Q9UPW5 1226 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 CETN3O15182 167 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
SIX4-201ENST00000216513 RPAP3Q9H6T3 665 aaPredicted RBP15.26■□□□□ 0.03
SIX4-201ENST00000216513 POLR2DO15514 142 aaKnown RBP15.26■□□□□ 0.03
SIX4-201ENST00000216513 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
SIX4-201ENST00000216513 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
SIX4-201ENST00000216513 PDXDC2PQ6P474 469 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 RIPOR2Q9Y4F9 1068 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 GOLGA6L7A0A1B0GV03 622 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 ANO1Q5XXA6 986 aa15.26■□□□□ 0.03
SIX4-201ENST00000216513 PUS7LQ9H0K6 701 aaKnown RBP15.26■□□□□ 0.03
SIX4-201ENST00000216513 CGNQ9P2M7 1197 aaKnown RBP15.26■□□□□ 0.03
SIX4-201ENST00000216513 NT5C3AQ9H0P0 336 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 MTIF3Q9H2K0 278 aaKnown RBP15.25■□□□□ 0.03
SIX4-201ENST00000216513 TMEM191BP0C7N4 346 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 MCM6Q14566 821 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 METTL23Q86XA0 190 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 PKNOX2Q96KN3 472 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 IFNKQ9P0W0 207 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 CAMTA2O94983 1202 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 STRIP1Q5VSL9 837 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 CEP170P1Q96L14 293 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 SYT1P21579 422 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
SIX4-201ENST00000216513 KCNJ6P48051 423 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 KIAA0753Q2KHM9 967 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 JPH2Q9BR39 696 aaPredicted RBP15.25■□□□□ 0.03
SIX4-201ENST00000216513 GUCA1BQ9UMX6 200 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 IKBKGQ9Y6K9 419 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 CAPN9O14815 690 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 RHOXF2BP0C7M4 288 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
SIX4-201ENST00000216513 OSTNP61366 133 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 NLRP4Q96MN2 994 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 RHOXF2Q9BQY4 288 aa15.25■□□□□ 0.03
SIX4-201ENST00000216513 AGLP35573 1532 aa15.24■□□□□ 0.03
SIX4-201ENST00000216513 KDM3AQ9Y4C1 1321 aa15.24■□□□□ 0.03
SIX4-201ENST00000216513 SRGAP2CP0DJJ0 459 aa15.24■□□□□ 0.03
SIX4-201ENST00000216513 NSMCE1Q8WV22 266 aa15.24■□□□□ 0.03
SIX4-201ENST00000216513 JAK2O60674 1132 aa15.24■□□□□ 0.03
SIX4-201ENST00000216513 STXBP2Q15833 593 aa15.24■□□□□ 0.03
SIX4-201ENST00000216513 UBE2SQ16763 222 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms