RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 GOLGA8KD6RF30 607 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 BBOX1O75936 387 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 ZNF76P36508 570 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 SARNPP82979 210 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 TMEM51Q9NW97 253 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 MAN1B1Q9UKM7 699 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 CEP104O60308 925 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 E2F5Q15329 346 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 AOC3Q16853 763 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 RUFY4Q6ZNE9 571 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 SAP30BPQ9UHR5 308 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 MRPS25P82663 173 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 ENOX1Q8TC92 643 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 NUP58Q9BVL2 599 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 RGS17Q9UGC6 210 aaPredicted RBP12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 ZNF804BA4D1E1 1349 aa12.81□□□□□ -0.36
DNMT3B-201ENST00000201963 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 DPF2Q92785 391 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 TACO1Q9BSH4 297 aaKnown RBP12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 KCNK9Q9NPC2 374 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 BCL9LQ86UU0 1499 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 A0A1W2PRG0 241 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 TRAF5O00463 557 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 PLA2G4AP47712 749 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 TRIM58Q8NG06 486 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 NLRC4Q9NPP4 1024 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 PPP1R7Q15435 360 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
DNMT3B-201ENST00000201963 PPP6R2O75170 966 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 COPB1P53618 953 aaKnown RBP12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 RRAGAQ7L523 313 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 RPAINQ86UA6 219 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 FERMT2Q96AC1 680 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 CLGNO14967 610 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 RPSAP08865 295 aaKnown RBP12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 GCKP35557 465 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 PEX19P40855 299 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 NAPAP54920 295 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 LACTBP83111 547 aaPredicted RBP12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 GRAPQ13588 217 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 GRAPLQ8TC17 118 aaPredicted RBP12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 FAM169AQ9Y6X4 670 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 KIF1AQ12756 1690 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 PTPROQ16827 1216 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 CCDC50Q8IVM0 306 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 ATP2B4P23634 1241 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 MTF1Q14872 753 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 LETM2Q2VYF4 491 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 CACNA2D3Q8IZS8 1091 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 LPIN2Q92539 896 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 CSRNP2Q9H175 543 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 ZNF287Q9HBT7 754 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 ZMYM6O95789 1325 aa12.79□□□□□ -0.36
DNMT3B-201ENST00000201963 CALM1P0DP23 149 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 CALM2P0DP24 149 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 CALM3P0DP25 149 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 GUCY2DQ02846 1103 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 ZMYM1Q5SVZ6 1142 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 LMBR1Q8WVP7 490 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 MCM9Q9NXL9 1143 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 MYO1AQ9UBC5 1043 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 ODF2LQ9ULJ1 636 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 HYOU1Q9Y4L1 999 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 MRFAP1Q9Y605 127 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 MAST3O60307 1309 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 ZNF532Q9HCE3 1301 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 ATP10DQ9P241 1426 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 BUB1O43683 1085 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 CCDC26Q8TAB7 109 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 RASAL2Q9UJF2 1139 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 XDHP47989 1333 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 MAP2P11137 1827 aaKnown RBP12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 TCP1P17987 556 aaKnown RBP12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 CXCR5P32302 372 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 CTNNA1P35221 906 aaKnown RBP12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 SLC9C1Q4G0N8 1177 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 APOA5Q6Q788 366 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 TEX11Q8IYF3 940 aa12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 AATFQ9NY61 560 aaKnown RBP eCLIP12.78□□□□□ -0.36
DNMT3B-201ENST00000201963 CNTNAP4Q9C0A0 1308 aa12.77□□□□□ -0.36
DNMT3B-201ENST00000201963 GNAT2P19087 354 aa12.77□□□□□ -0.36
DNMT3B-201ENST00000201963 CETN2P41208 172 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms