RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 SKA2Q8WVK7 121 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-201ENST00000200181 CHMP6Q96FZ7 201 aa18.77■□□□□ 0.6
ITGB4-201ENST00000200181 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
ITGB4-201ENST00000200181 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
ITGB4-201ENST00000200181 KDRP35968 1356 aa18.77■□□□□ 0.6
ITGB4-201ENST00000200181 IFNAR2P48551 515 aa18.77■□□□□ 0.59
ITGB4-201ENST00000200181 ETF1P62495 437 aaKnown RBP18.77■□□□□ 0.59
ITGB4-201ENST00000200181 RAB44Q7Z6P3 723 aaPredicted RBP18.77■□□□□ 0.59
ITGB4-201ENST00000200181 RRP15Q9Y3B9 282 aaKnown RBP18.77■□□□□ 0.59
ITGB4-201ENST00000200181 PRPSAP1Q14558 356 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 KLHDC4Q8TBB5 520 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 CCDC138Q96M89 665 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 MMS19Q96T76 1030 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 E7EWF7 191 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 H2AFZP0C0S5 128 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 H2AFVQ71UI9 128 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 ZNF594Q96JF6 807 aaPredicted RBP18.76■□□□□ 0.59
ITGB4-201ENST00000200181 H7C0C1 242 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 K7ENM7 598 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 ATP5OP48047 213 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 PDE1BQ01064 536 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 TMED1Q13445 227 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 TRAPPC3LQ5T215 181 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 RAPH1Q70E73 1250 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.76■□□□□ 0.59
ITGB4-201ENST00000200181 ZNF532Q9HCE3 1301 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 G2E3Q7L622 706 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 SPZ1Q9BXG8 430 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 PTPN22Q9Y2R2 807 aa18.76■□□□□ 0.59
ITGB4-201ENST00000200181 H7C1D1 291 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 GNPATO15228 680 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 TRIM42Q8IWZ5 723 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 SPATA5Q8NB90 893 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 MCUQ8NE86 351 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 ATP8A2Q9NTI2 1148 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 ZNF500O60304 480 aaPredicted RBP18.75■□□□□ 0.59
ITGB4-201ENST00000200181 NAA35Q5VZE5 725 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 TECP42680 631 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 GLG1Q92896 1179 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 CCDC124Q96CT7 223 aaKnown RBP18.75■□□□□ 0.59
ITGB4-201ENST00000200181 ANLNQ9NQW6 1124 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 PARD3Q8TEW0 1356 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 NR1I2O75469 434 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 ABL1P00519 1130 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 TFAP4Q01664 338 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 ZBTB8OSQ8IWT0 167 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 HESX1Q9UBX0 185 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 ANGPTL3Q9Y5C1 460 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 BZW2Q9Y6E2 419 aaKnown RBP18.75■□□□□ 0.59
ITGB4-201ENST00000200181 MAPKAPK5Q8IW41 473 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 EFCAB13Q8IY85 973 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 TRIML1Q8N9V2 468 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 LPIN2Q92539 896 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 SEPT8Q92599 483 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 ANAPC5Q9UJX4 755 aa18.75■□□□□ 0.59
ITGB4-201ENST00000200181 SH3TC1Q8TE82 1336 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 TSTA3Q13630 321 aaPredicted RBP18.74■□□□□ 0.59
ITGB4-201ENST00000200181 TRPA1O75762 1119 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 POLR2BP30876 1174 aaKnown RBP18.74■□□□□ 0.59
ITGB4-201ENST00000200181 METTL13Q8N6R0 699 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 DSCC1Q9BVC3 393 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 SEC31AO94979 1220 aaKnown RBP18.74■□□□□ 0.59
ITGB4-201ENST00000200181 BRD1O95696 1058 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 LMNB2Q03252 620 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 FAM47AQ5JRC9 791 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 HOOK2Q96ED9 719 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 SCOCQ9UIL1 159 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 PALM3A6NDB9 673 aaPredicted RBP18.74■□□□□ 0.59
ITGB4-201ENST00000200181 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
ITGB4-201ENST00000200181 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.73■□□□□ 0.59
ITGB4-201ENST00000200181 RFX6Q8HWS3 928 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.73■□□□□ 0.59
ITGB4-201ENST00000200181 ZFYVE9O95405 1425 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 A6NJR5 290 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 GSTA4O15217 222 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 EHHADHQ08426 723 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 TGFBRAP1Q8WUH2 860 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 EFHD1Q9BUP0 239 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 TAF5LO75529 589 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 NOSTRINQ8IVI9 506 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 ZNF710Q8N1W2 664 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 PPM1KQ8N3J5 372 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 KRT82Q9NSB4 513 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 SGK1O00141 431 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 NSFP46459 744 aaKnown RBP18.73■□□□□ 0.59
ITGB4-201ENST00000200181 POLE2P56282 527 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 DMTNQ08495 405 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 ME3Q16798 604 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 HP1BP3Q5SSJ5 553 aaPredicted RBP18.73■□□□□ 0.59
ITGB4-201ENST00000200181 BLIDQ8IZY5 108 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 RABGGTAQ92696 567 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 EPN1Q9Y6I3 576 aaPredicted RBP18.73■□□□□ 0.59
ITGB4-201ENST00000200181 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
ITGB4-201ENST00000200181 METTL14Q9HCE5 456 aaKnown RBP18.73■□□□□ 0.59
ITGB4-201ENST00000200181 PPARAQ07869 468 aa18.72■□□□□ 0.59
ITGB4-201ENST00000200181 IFRD2Q12894 506 aaPredicted RBP18.72■□□□□ 0.59
ITGB4-201ENST00000200181 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
ITGB4-201ENST00000200181 C8orf37Q96NL8 207 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms