RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 CDC25BP30305 580 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 PIK3AP1Q6ZUJ8 805 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 METTL16Q86W50 562 aaKnown RBP12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 KRI1Q8N9T8 703 aaKnown RBP12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 SHTN1A0MZ66 631 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 KIF2AO00139 706 aaPredicted RBP12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 CTAGE5O15320 804 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 CUTAO60888 179 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 GYS2P54840 703 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 MDM2Q00987 491 aaPredicted RBP12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 CCDC178Q5BJE1 867 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
GPATCH1-201ENST00000170564 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 VIL1P09327 827 aaKnown RBP12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 KRBA2Q6ZNG9 492 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 SRPRBQ9Y5M8 271 aaKnown RBP12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 SERPINC1P01008 464 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 NLRP5P59047 1200 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 ZNF174Q15697 407 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 E4F1Q66K89 784 aaPredicted RBP12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
GPATCH1-201ENST00000170564 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SYKP43405 635 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 PRELPP51888 382 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 TTBK2Q6IQ55 1244 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 TATDN1Q6P1N9 297 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 HEATR3Q7Z4Q2 680 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 C10orf67Q8IYJ2 551 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 RTKN2Q8IZC4 609 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 PIGSQ96S52 555 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 RIOX1Q9H6W3 641 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 PCDHA6Q9UN73 950 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 PCDHA8Q9Y5H6 950 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 XBP1P17861 261 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 PNOCQ13519 176 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 KCNH3Q9ULD8 1083 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 PCDHA4Q9UN74 947 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 EDIL3O43854 480 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 TTLL1O95922 423 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 CAPN2P17655 700 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 BMP6P22004 513 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SKIDA1Q1XH10 827 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SARM1Q6SZW1 724 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 SUPT20HQ8NEM7 779 aa12.79□□□□□ -0.36
GPATCH1-201ENST00000170564 TRIM75PA6NK02 468 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 GRAMD1CQ8IYS0 662 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 LARGE2Q8N3Y3 721 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 VAT1LQ9HCJ6 419 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 GPS2Q13227 327 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 PTGDRQ13258 359 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 FHOD1Q9Y613 1164 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 NFKBIEO00221 500 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 LMAN1P49257 510 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 PI4KBQ9UBF8 816 aa12.78□□□□□ -0.36
GPATCH1-201ENST00000170564 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 EGFRP00533 1210 aa12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 PRR29P0C7W0 189 aa12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 CYP2C19P33261 490 aa12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 GNAQP50148 359 aa12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 ARMCX5Q6P1M9 558 aa12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 TUBE1Q9UJT0 475 aa12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 SCAF8Q9UPN6 1271 aaKnown RBP12.77□□□□□ -0.36
GPATCH1-201ENST00000170564 MPHOSPH10O00566 681 aaKnown RBP12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 GDF11O95390 407 aa12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 OAS2P29728 719 aaKnown RBP12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 ZNF543Q08ER8 600 aa12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 KCTD1Q719H9 257 aa12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 DAGLBQ8NCG7 672 aa12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 DHX36Q9H2U1 1008 aaKnown RBP12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 JMJD4Q9H9V9 463 aa12.77□□□□□ -0.37
GPATCH1-201ENST00000170564 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 HLA-DOAP06340 250 aa12.76□□□□□ -0.37
GPATCH1-201ENST00000170564 EEF2P13639 858 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms