RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 PARD6BQ9BYG5 372 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
CTNS-201ENST00000046640 KIAA1551Q9HCM1 1747 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 A0A1B0GTH6 734 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 CCDC66A2RUB6 948 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 ZRANB2O95218 330 aaKnown RBP eCLIP14.8□□□□□ -0.04
CTNS-201ENST00000046640 RPN1P04843 607 aaKnown RBP14.8□□□□□ -0.04
CTNS-201ENST00000046640 OAS2P29728 719 aaKnown RBP14.8□□□□□ -0.04
CTNS-201ENST00000046640 TXLNAP40222 546 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 NELFBQ8WX92 580 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 GPCPD1Q9NPB8 672 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 IL1R1P14778 569 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 CASP14P31944 242 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 HSPA1LP34931 641 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 PRCPP42785 496 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 GNAQP50148 359 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 PPFIBP1Q86W92 1011 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 LRRC15Q8TF66 581 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 COA7Q96BR5 231 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 QTRT2Q9H974 415 aaKnown RBP14.79□□□□□ -0.04
CTNS-201ENST00000046640 DAGLAQ9Y4D2 1042 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 N4BP3O15049 544 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 TECP42680 631 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 C16orf86Q6ZW13 317 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 COL24A1Q17RW2 1714 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 M0R2N6 131 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 GTPBP6O43824 516 aaPredicted RBP14.79□□□□□ -0.04
CTNS-201ENST00000046640 HNRNPH2P55795 449 aaKnown RBP14.79□□□□□ -0.04
CTNS-201ENST00000046640 NAALADL2Q58DX5 795 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 DISC1Q9NRI5 854 aa14.79□□□□□ -0.04
CTNS-201ENST00000046640 ADD3Q9UEY8 706 aaKnown RBP14.79□□□□□ -0.04
CTNS-201ENST00000046640 AKR1B15C9JRZ8 316 aaPredicted RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 BBOX1O75936 387 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 LONP1P36776 959 aaKnown RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 PMS1P54277 932 aaKnown RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 CACNB3P54284 484 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 KRT31Q15323 416 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 CC2D1AQ6P1N0 951 aaPredicted RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 DPP8Q6V1X1 898 aaPredicted RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 CCDC148Q8NFR7 591 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 DDX4Q9NQI0 724 aaKnown RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 KCNQ5Q9NR82 932 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 SEC63Q9UGP8 760 aaKnown RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 RNF225M0QZC1 329 aaPredicted RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 POLRMTO00411 1230 aaKnown RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 MYO1BO43795 1136 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 STX10O60499 249 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 TBC1D8O95759 1140 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 AKR1B1P15121 316 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 MAP3K9P80192 1104 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 PAK1Q13153 545 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 CERS5Q8N5B7 392 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 HPS3Q969F9 1004 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 ZNF287Q9HBT7 754 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 SH3GLB2Q9NR46 395 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 TTF2Q9UNY4 1162 aaKnown RBP14.78□□□□□ -0.04
CTNS-201ENST00000046640 MRFAP1Q9Y605 127 aa14.78□□□□□ -0.04
CTNS-201ENST00000046640 FAM196BA6NMK8 535 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 MPHOSPH10O00566 681 aaKnown RBP14.77□□□□□ -0.04
CTNS-201ENST00000046640 PPEF1O14829 653 aaPredicted RBP14.77□□□□□ -0.04
CTNS-201ENST00000046640 ABL1P00519 1130 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 FXR1P51114 621 aaKnown RBP eCLIP14.77□□□□□ -0.04
CTNS-201ENST00000046640 SMC1AQ14683 1233 aaKnown RBP14.77□□□□□ -0.04
CTNS-201ENST00000046640 TXNRD1Q16881 649 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 SOGA3Q5TF21 947 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 CDKAL1Q5VV42 579 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 MSL1Q68DK7 614 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 RAD9BQ6WBX8 426 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 CERKQ8TCT0 537 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 RRP36Q96EU6 259 aaKnown RBP14.77□□□□□ -0.04
CTNS-201ENST00000046640 SRRTQ9BXP5 876 aaKnown RBP14.77□□□□□ -0.04
CTNS-201ENST00000046640 PCDHAC2Q9Y5I4 1007 aa14.77□□□□□ -0.04
CTNS-201ENST00000046640 G3V3G9 751 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 TUBB4AP04350 444 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 SLC16A2P36021 539 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 TXKP42681 527 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 MCM6Q14566 821 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 FILIP1LQ4L180 1135 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 ZNF569Q5MCW4 686 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 ARL6IP4Q66PJ3 421 aaKnown RBP14.77□□□□□ -0.05
CTNS-201ENST00000046640 PROM2Q8N271 834 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 TBCKQ8TEA7 893 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 GJA10Q969M2 543 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 ZC3H12CQ9C0D7 883 aaKnown RBP14.77□□□□□ -0.05
CTNS-201ENST00000046640 ARFGAP3Q9NP61 516 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 TCP11L1Q9NUJ3 509 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 SPATA31A6Q5VVP1 1343 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 LAMB1P07942 1786 aa14.77□□□□□ -0.05
CTNS-201ENST00000046640 SNED1Q8TER0 1413 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 ADRA2BP18089 450 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 CYP2C19P33261 490 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 KIFC2Q96AC6 838 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 TRPC5Q9UL62 973 aaPredicted RBP14.76□□□□□ -0.05
CTNS-201ENST00000046640 ROBO3Q96MS0 1386 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 ZNF831Q5JPB2 1677 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 VGLL3A8MV65 326 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms