RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 FAM133AQ8N9E0 248 aa18.82■□□□□ 0.6
ERCC1-201ENST00000013807 FERMT2Q96AC1 680 aa18.82■□□□□ 0.6
ERCC1-201ENST00000013807 TRIM43Q96BQ3 446 aaPredicted RBP18.82■□□□□ 0.6
ERCC1-201ENST00000013807 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
ERCC1-201ENST00000013807 TACC3Q9Y6A5 838 aa18.82■□□□□ 0.6
ERCC1-201ENST00000013807 A0A1W2PQ45 241 aaPredicted RBP18.81■□□□□ 0.6
ERCC1-201ENST00000013807 A0A1W2PQY0 241 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 TSPY2A6NKD2 308 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 ACLYP53396 1101 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 CTDSPL2Q05D32 466 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 MCMDC2Q4G0Z9 681 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 VPS53Q5VIR6 699 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 KATNBL1Q9H079 304 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 UPF3AQ9H1J1 476 aaKnown RBP18.81■□□□□ 0.6
ERCC1-201ENST00000013807 ACAD9Q9H845 621 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 TCP11L1Q9NUJ3 509 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
ERCC1-201ENST00000013807 STXBP5LQ9Y2K9 1186 aa18.81■□□□□ 0.6
ERCC1-201ENST00000013807 CUL9Q8IWT3 2517 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 SYNRGQ9UMZ2 1314 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 KIAA0355O15063 1070 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 FGAP02671 866 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 MCCP23508 829 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 SH3RF1Q7Z6J0 888 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 NUP133Q8WUM0 1156 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 BADQ92934 168 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 INCENPQ9NQS7 918 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 STX8Q9UNK0 236 aa18.8■□□□□ 0.6
ERCC1-201ENST00000013807 ELP1O95163 1332 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 MYCNP04198 464 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-201ENST00000013807 CLTBP09497 229 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 GJA9P57773 515 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 BTNL9Q6UXG8 535 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 Q7L0L9 218 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 OSBPL3Q9H4L5 887 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 PRR12Q9ULL5 1215 aa18.79■□□□□ 0.6
ERCC1-201ENST00000013807 LRRC37A2A6NM11 1700 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 A0A0D9SFI3 127 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 ADCY6O43306 1168 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 NMT2O60551 498 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
ERCC1-201ENST00000013807 PCP11498 1178 aaKnown RBP18.78■□□□□ 0.6
ERCC1-201ENST00000013807 CNTN2Q02246 1040 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 SHHQ15465 462 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 KCNA10Q16322 511 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 CCDC144BQ3MJ40 725 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 PCSK9Q8NBP7 692 aaKnown RBP18.78■□□□□ 0.6
ERCC1-201ENST00000013807 LENG1Q96BZ8 264 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-201ENST00000013807 FAM227BQ96M60 508 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 AGBL1Q96MI9 1066 aa18.78■□□□□ 0.6
ERCC1-201ENST00000013807 A1CFQ9NQ94 594 aaKnown RBP18.78■□□□□ 0.6
ERCC1-201ENST00000013807 ZHX1Q9UKY1 873 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-201ENST00000013807 RANBP6O60518 1105 aaKnown RBP18.77■□□□□ 0.6
ERCC1-201ENST00000013807 ITGB8P26012 769 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 SLC4A3P48751 1232 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 CDK7P50613 346 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 KCTD1Q719H9 257 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 DCAF4Q8WV16 495 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 TRERF1Q96PN7 1200 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 PRDM5Q9NQX1 630 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-201ENST00000013807 STARD7Q9NQZ5 370 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 RNF146Q9NTX7 359 aa18.77■□□□□ 0.6
ERCC1-201ENST00000013807 LAMA4Q16363 1823 aa18.77■□□□□ 0.59
ERCC1-201ENST00000013807 SOWAHBA6NEL2 793 aa18.76■□□□□ 0.59
ERCC1-201ENST00000013807 ASB14A6NK59 587 aa18.76■□□□□ 0.59
ERCC1-201ENST00000013807 CTAGE5O15320 804 aa18.76■□□□□ 0.59
ERCC1-201ENST00000013807 NT5C2P49902 561 aa18.76■□□□□ 0.59
ERCC1-201ENST00000013807 FAAP100Q0VG06 881 aa18.76■□□□□ 0.59
ERCC1-201ENST00000013807 SLC17A8Q8NDX2 589 aa18.76■□□□□ 0.59
ERCC1-201ENST00000013807 TTC14Q96N46 770 aa18.76■□□□□ 0.59
ERCC1-201ENST00000013807 RANBP17Q9H2T7 1088 aaKnown RBP18.76■□□□□ 0.59
ERCC1-201ENST00000013807 RWDD1Q9H446 243 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-201ENST00000013807 LOC102724159A0A0B4J2E5 919 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 MYADML2A6NDP7 307 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 ICAM1P05362 532 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 TOP1P11387 765 aaKnown RBP18.75■□□□□ 0.59
ERCC1-201ENST00000013807 PWP2Q15269 919 aaKnown RBP18.75■□□□□ 0.59
ERCC1-201ENST00000013807 C9orf50Q5SZB4 431 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 MORC4Q8TE76 937 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 GLT1D1Q96MS3 346 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 SPC25Q9HBM1 224 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 HOMER2Q9NSB8 354 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 CYP39A1Q9NYL5 469 aa18.75■□□□□ 0.59
ERCC1-201ENST00000013807 GNEQ9Y223 722 aaKnown RBP18.75■□□□□ 0.59
ERCC1-201ENST00000013807 ASTN1O14525 1302 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 MROH7Q68CQ1 1323 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 DCDC2CA8MYV0 355 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 ASGR1P07306 291 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 SMAD3P84022 425 aaKnown RBP18.74■□□□□ 0.59
ERCC1-201ENST00000013807 IKQ13123 557 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-201ENST00000013807 NMIQ13287 307 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-201ENST00000013807 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
ERCC1-201ENST00000013807 TMEM47Q9BQJ4 181 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 TBX21Q9UL17 535 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 Q9Y3F1 56 aa18.74■□□□□ 0.59
ERCC1-201ENST00000013807 UNC80Q8N2C7 3258 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms