RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 LACRTQ9GZZ8 138 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 DEF6Q9H4E7 631 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 HPCAL4Q9UM19 191 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 DUSP10Q9Y6W6 482 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 EIF3CLB5ME19 914 aaKnown RBP11.77□□□□□ -0.52
CX3CL1-201ENST00000006053 KRT83P78385 493 aa11.77□□□□□ -0.52
CX3CL1-201ENST00000006053 GPKOWQ92917 476 aaPredicted RBP eCLIP11.77□□□□□ -0.52
CX3CL1-201ENST00000006053 EIF3CQ99613 913 aaKnown RBP11.77□□□□□ -0.52
CX3CL1-201ENST00000006053 ZNHIT6Q9NWK9 470 aaKnown RBP11.77□□□□□ -0.52
CX3CL1-201ENST00000006053 ANAPC4Q9UJX5 808 aa11.77□□□□□ -0.52
CX3CL1-201ENST00000006053 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 RCCD1A6NED2 376 aa11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 IDEP14735 1019 aa11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 CYLC1P35663 651 aaPredicted RBP11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 GGCXP38435 758 aa11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 MRPS25P82663 173 aaKnown RBP11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 C2orf54Q08AI8 447 aa11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 CCDC152Q4G0S7 254 aa11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 ADSSL1Q8N142 457 aa11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 MKRN1Q9UHC7 482 aaKnown RBP11.77□□□□□ -0.53
CX3CL1-201ENST00000006053 MYBL2P10244 700 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 MCM3P25205 808 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 CKAP4Q07065 602 aaKnown RBP11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 CAPN11Q9UMQ6 739 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 TIAM2Q8IVF5 1701 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 MYH2Q9UKX2 1941 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 PSMA7O14818 248 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 UBA7P41226 1012 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 EGFL6Q8IUX8 553 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 COG1Q8WTW3 980 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 DNAJC7Q99615 494 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 ERVV-1B6SEH8 477 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 RPS6KA5O75582 802 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 DDAH1O94760 285 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 LONP1P36776 959 aaKnown RBP11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 MATR3P43243 847 aaKnown RBP eCLIP11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 CSGALNACT2Q8N6G5 542 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 C8orf37Q96NL8 207 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 TUBGCP2Q9BSJ2 902 aa11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 NHEJ1Q9H9Q4 299 aaPredicted RBP11.76□□□□□ -0.53
CX3CL1-201ENST00000006053 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 PAPD7Q5XG87 772 aaKnown RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 DTHD1Q6ZMT9 781 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 ZNF507Q8TCN5 953 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 SELENOOQ9BVL4 669 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 VIPAS39Q9H9C1 493 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 EEF1GP26641 437 aaKnown RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 MTIF2P46199 727 aaKnown RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 DNM2P50570 870 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 KCNQ4P56696 695 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 BLIDQ8IZY5 108 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 EHBP1Q8NDI1 1231 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 PSMB7Q99436 277 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 EXOC1Q9NV70 894 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 CCDC194A0A1B0GVG4 234 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 A0A1W2PQC6 194 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 TSPY2A6NKD2 308 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 PRPF6O94906 941 aaKnown RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 CYP2D6P10635 497 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 TTC31Q49AM3 519 aaPredicted RBP11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 KRT26Q7Z3Y9 468 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 TMEM60Q9H2L4 133 aa11.75□□□□□ -0.53
CX3CL1-201ENST00000006053 MYH3P11055 1940 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 MAGEA9P43362 315 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 AARSP49588 968 aaKnown RBP eCLIP11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 KIF5AQ12840 1032 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 CCDC96Q2M329 555 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 NAALADL2Q58DX5 795 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 CCDC178Q5BJE1 867 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 PPFIA4O75335 1185 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 INF2Q27J81 1249 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 FKBP15Q5T1M5 1219 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 CCDC70Q6NSX1 233 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 CCNI2Q6ZMN8 369 aaPredicted RBP11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 SND1Q7KZF4 910 aaKnown RBP eCLIP11.74□□□□□ -0.533e-13■■■■■ 41.6
CX3CL1-201ENST00000006053 THAP9Q9H5L6 903 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 LRWD1Q9UFC0 647 aa11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 NIP7Q9Y221 180 aaKnown RBP eCLIP11.74□□□□□ -0.53
CX3CL1-201ENST00000006053 SATB1Q01826 763 aa11.73□□□□□ -0.53
CX3CL1-201ENST00000006053 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
CX3CL1-201ENST00000006053 C4orf32Q8N8J7 132 aa11.73□□□□□ -0.53
CX3CL1-201ENST00000006053 FAM76AQ8TAV0 307 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms