RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 CRACR2BQ8N4Y2 399 aaPredicted RBP22.01■■□□□ 1.11
HOXA11-201ENST00000006015 GNL3LQ9NVN8 582 aaKnown RBP22.01■■□□□ 1.11
HOXA11-201ENST00000006015 LUC7L2Q9Y383 392 aaKnown RBP22.01■■□□□ 1.11
HOXA11-201ENST00000006015 TTC26A0AVF1 554 aa22.01■■□□□ 1.11
HOXA11-201ENST00000006015 SKOR1P84550 965 aa22.01■■□□□ 1.11
HOXA11-201ENST00000006015 SPATS2Q86XZ4 545 aaKnown RBP22.01■■□□□ 1.11
HOXA11-201ENST00000006015 CCDC24Q8N4L8 307 aa22.01■■□□□ 1.11
HOXA11-201ENST00000006015 MYH13Q9UKX3 1938 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 EPB41P11171 864 aaKnown RBP22■■□□□ 1.11
HOXA11-201ENST00000006015 TDO2P48775 406 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 PPP1R3FQ6ZSY5 799 aaPredicted RBP22■■□□□ 1.11
HOXA11-201ENST00000006015 SND1Q7KZF4 910 aaKnown RBP eCLIP22■■□□□ 1.11
HOXA11-201ENST00000006015 RPAINQ86UA6 219 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 ANKRD18AQ8IVF6 992 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 KRT23Q9C075 422 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 EHD4Q9H223 541 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 A0A1W2PQC6 194 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 FNBP4Q8N3X1 1017 aaPredicted RBP22■■□□□ 1.11
HOXA11-201ENST00000006015 MMGT1Q8N4V1 131 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 SDR42E1Q8WUS8 393 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 NELFBQ8WX92 580 aa22■■□□□ 1.11
HOXA11-201ENST00000006015 XDHP47989 1333 aa21.99■■□□□ 1.11
HOXA11-201ENST00000006015 PDE2AO00408 941 aaPredicted RBP21.99■■□□□ 1.11
HOXA11-201ENST00000006015 COBLO75128 1261 aa21.99■■□□□ 1.11
HOXA11-201ENST00000006015 CYLC1P35663 651 aaPredicted RBP21.99■■□□□ 1.11
HOXA11-201ENST00000006015 PSEN1P49768 467 aa21.99■■□□□ 1.11
HOXA11-201ENST00000006015 RCAN1P53805 252 aa21.99■■□□□ 1.11
HOXA11-201ENST00000006015 C2orf54Q08AI8 447 aa21.99■■□□□ 1.11
HOXA11-201ENST00000006015 CMTR1Q8N1G2 835 aaKnown RBP21.99■■□□□ 1.11
HOXA11-201ENST00000006015 CAPN11Q9UMQ6 739 aa21.99■■□□□ 1.11
HOXA11-201ENST00000006015 CCDC82Q8N4S0 544 aa21.99■■□□□ 1.11
HOXA11-201ENST00000006015 MYH6P13533 1939 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 TAF1P21675 1872 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 KIAA0754O94854 1291 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 IDEP14735 1019 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 CYP7A1P22680 504 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 ITIH3Q06033 890 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 AKNAD1Q5T1N1 836 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 MFSD6Q6ZSS7 791 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 MB21D1Q8N884 522 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 PYM1Q9BRP8 204 aaKnown RBP21.98■■□□□ 1.11
HOXA11-201ENST00000006015 A1CFQ9NQ94 594 aaKnown RBP21.98■■□□□ 1.11
HOXA11-201ENST00000006015 NRAPQ86VF7 1730 aa21.98■■□□□ 1.11
HOXA11-201ENST00000006015 LGALS16A8MUM7 142 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 IPO7O95373 1038 aaKnown RBP21.97■■□□□ 1.11
HOXA11-201ENST00000006015 WTAPQ15007 396 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 MEA1Q16626 185 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 FAM182BQ5T319 152 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 ZNF658Q5TYW1 1059 aaPredicted RBP21.97■■□□□ 1.11
HOXA11-201ENST00000006015 WDR59Q6PJI9 974 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 BARGINQ6ZT62 677 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 CABS1Q96KC9 395 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 RMND1Q9NWS8 449 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 ZNF185O15231 689 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 GTPBP6O43824 516 aaPredicted RBP21.97■■□□□ 1.11
HOXA11-201ENST00000006015 FSBPO95073 299 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 CCDC172P0C7W6 258 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 XBP1P17861 261 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 ALS2CLQ60I27 953 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 ZNF572Q7Z3I7 529 aaPredicted RBP21.97■■□□□ 1.11
HOXA11-201ENST00000006015 CELF1Q92879 486 aaKnown RBP21.97■■□□□ 1.11
HOXA11-201ENST00000006015 PURBQ96QR8 312 aaKnown RBP21.97■■□□□ 1.11
HOXA11-201ENST00000006015 RUFY1Q96T51 708 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 TFR2Q9UP52 801 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 ZNF652Q9Y2D9 606 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 CAPN7Q9Y6W3 813 aa21.97■■□□□ 1.11
HOXA11-201ENST00000006015 H7C1D1 291 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 NDUFAB1O14561 156 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 TBC1D9BQ66K14 1250 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 TACO1Q9BSH4 297 aaKnown RBP21.96■■□□□ 1.11
HOXA11-201ENST00000006015 BLZF1Q9H2G9 400 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 JADE2Q9NQC1 790 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 FAM205CA6NFA0 338 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 MINDY4BA8MYZ0 360 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 KRT2P35908 639 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 EPHB4P54760 987 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 EMBQ6PCB8 327 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 RRP36Q96EU6 259 aaKnown RBP21.96■■□□□ 1.11
HOXA11-201ENST00000006015 RABEP2Q9H5N1 569 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 SAMM50Q9Y512 469 aa21.96■■□□□ 1.11
HOXA11-201ENST00000006015 ERICH2A1L162 156 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 PARP1P09874 1014 aaKnown RBP21.95■■□□□ 1.1
HOXA11-201ENST00000006015 KLRK1P26718 216 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 DDR1Q08345 913 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 CCDC170Q8IYT3 715 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 STAMQ92783 540 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 C8orf37Q96NL8 207 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 MTA3Q9BTC8 594 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 RNF26Q9BY78 433 aaPredicted RBP21.95■■□□□ 1.1
HOXA11-201ENST00000006015 VPS54Q9P1Q0 977 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 SRP68Q9UHB9 627 aaKnown RBP21.95■■□□□ 1.1
HOXA11-201ENST00000006015 ARAP2Q8WZ64 1704 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 PDS5AQ29RF7 1337 aaKnown RBP21.95■■□□□ 1.1
HOXA11-201ENST00000006015 ZEB2O60315 1214 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 HSF2BPO75031 334 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 FNTAP49354 379 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 TMTC2Q8N394 836 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 OTUD6BQ8N6M0 293 aa21.95■■□□□ 1.1
HOXA11-201ENST00000006015 TSGA10Q9BZW7 698 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms