RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Slit1Q80TR4 1531 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Crb1Q8VHS2 1405 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Armcx3Q8BHS6 379 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Map10Q8BJS7 891 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Zfp317Q8C0Q5 607 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Rbm41Q8JZV4 413 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 RabggtaQ9JHK4 567 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Nr2e3Q9QXZ7 395 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Col14a1Q80X19 1797 aa15.27■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Prdm2A2A7B5 1709 aaKnown RBP15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Mroh8E9PYI4 1049 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Usp53P15975 1069 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ftl1P29391 183 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Gm5935Q497S0 212 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Dzip1lQ499E4 774 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Krt14Q61781 484 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 CrkQ64010 304 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Bbs9Q811G0 885 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Zfpm1O35615 995 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Eif3j1Q3UGC7 261 aaKnown RBP15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Znf496Q5SXI5 585 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Eif3j2Q66JS6 263 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Gigyf2Q6Y7W8 1291 aaKnown RBP15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ddx41Q91VN6 622 aaKnown RBP15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Telo2Q9DC40 840 aaKnown RBP15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Stk32bQ9JJX8 414 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Nxf2Q4ZGD8 691 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Mpp4Q6P7F1 635 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 CnstQ8CBC4 711 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Sar1bQ9CQC9 198 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 MycbpQ9EQS3 103 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 SmapQ9R0P4 181 aaKnown RBP15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Cpb1B2RS76 415 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Spata21Q8BHW6 681 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 MypopQ8R4U1 393 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Map3k15A2AQW0 1331 aa15.26■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Sox13Q04891 613 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Map3k9Q3U1V8 1077 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Panx2Q6IMP4 677 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Lztfl1Q9JHQ5 299 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 VimP20152 466 aaKnown RBP15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Tmem132dQ76HP3 1097 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Fsip1Q9D3V5 435 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Kif13aQ9EQW7 1749 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Tldc2A2ACG1 198 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Neurog2P70447 263 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Mier3Q3UHF3 551 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Sfi1Q3UZY0 1216 aaKnown RBP15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Cdc23Q8BGZ4 597 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Clic6Q8BHB9 596 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Add3Q9QYB5 706 aaKnown RBP15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Gm10110D3Z5M2 615 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Actn3O88990 900 aaKnown RBP15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Cct5P80316 541 aaKnown RBP15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Kctd1Q5M956 257 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ushbp1Q8R370 680 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Plcb1Q9Z1B3 1216 aa15.25■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Gpr161B2RPY5 545 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Gm9992B2RWK3 458 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Grem2O88273 168 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Unc93aQ710D3 458 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ublcp1Q8BGR9 318 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Spire2Q8K1S6 718 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 GlyctkQ8QZY2 523 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Asic2Q925H0 512 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ankrd63A2ARS0 390 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Tex35Q14BK3 207 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Pdzph1Q8BGR1 1238 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Tspyl4Q8VD63 406 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ppp2r5dQ91V89 594 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Gm5169Q5M8P2 212 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Cd209bQ8CJ91 325 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Tnrc6bQ8BKI2 1810 aaKnown RBP15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Card6E9PWH2 1175 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ap1b1O35643 943 aaKnown RBP15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Psmb7P70195 277 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Slc8a1P70414 970 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Snai1Q02085 264 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Arhgef18Q6P9R4 1021 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Nacc1Q7TSZ8 514 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Naa25Q8BWZ3 972 aa15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Eif4enif1Q9EST3 983 aaKnown RBP15.24■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Apol7aB2RT54 418 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Cd22P35329 862 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Dnm2P39054 870 aaKnown RBP15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Pcif1P59114 706 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Scnn1aQ61180 699 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Churc1Q6DG52 112 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Krt34Q9D646 392 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Rilpl1Q9JJC6 406 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Alppl2P24823 529 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Agbl1Q09M05 972 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Gpr162Q3UN16 588 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Hdac4Q6NZM9 1076 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Ctdspl2Q8BG15 465 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Scfd1Q8BRF7 639 aaKnown RBP15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Defb15Q8R2I5 79 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Pcdha12Q91Y18 950 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 Serpinb12Q9D7P9 423 aa15.23■□□□□ 0.03
Pcdha1-202ENSMUST00000193839 NktrP30415 1453 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 64.2 ms