RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Taf12Q8VE65 161 aa17.61■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Speer3W4VSP1 261 aa17.61■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Rad23aP54726 363 aa17.61■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 PsdQ5DTT2 1024 aa17.61■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Tmem179Q8BHH9 233 aa17.61■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Mroh6V9GX81 722 aa17.61■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Cfap70D3YVL2 1141 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Krt9Q6RHW0 743 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Nrbp1Q99J45 535 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 NkapQ9D0F4 415 aaKnown RBP17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Trip6Q9Z1Y4 480 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Rhpn1Q61085 643 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Sumf1Q8R0F3 372 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Rfc4Q99J62 364 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Rsph3bQ9DA80 389 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Gm11549A0A286YD83 63 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Rnf40Q3U319 1001 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Rab34Q64008 259 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 IqceQ6PCQ0 778 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Galnt17Q7TT15 598 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 ChmQ9QXG2 665 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Npc1l1Q6T3U4 1333 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 AdgbG3UZ78 1657 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Arhgef28P97433 1693 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Gm6583E9Q8Z1 469 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Taco1Q8K0Z7 294 aaKnown RBP17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Gkap1Q9JMB0 366 aa17.6■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Heatr4E9Q357 955 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Gbp9Q8BTS3 619 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Osbpl1aQ91XL9 950 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Cxcl11Q9JHH5 100 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Sept3Q9Z1S5 350 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Rnaseh1O70338 285 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Ddx39aQ8VDW0 427 aaKnown RBP17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Cdca7lQ922M5 438 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Actn2Q9JI91 894 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Ovgp1Q62010 721 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Ctnna3Q65CL1 895 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Tbc1d23Q8K0F1 684 aa17.59■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Slc7a6osQ7TPE5 306 aa17.58■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Cd2bp2Q9CWK3 342 aaKnown RBP17.58■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Ppp2r3dQ9Z176 491 aa17.58■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 EnahQ03173 802 aa17.58■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 Trpc3Q9QZC1 836 aa17.58■□□□□ 0.41
Pcdh1-203ENSMUST00000160721 AdkP55264 361 aa17.58■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Tmed1Q3V009 227 aa17.58■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ces5aQ6AW46 575 aa17.58■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Pcdha7Q91Y13 937 aa17.58■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Pcdhb9E9Q5G2 828 aa17.58■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Sulf1Q8K007 870 aa17.58■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Zfp174B9EJW5 407 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Eef1bO70251 225 aaKnown RBP17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Skiv2lQ6NZR5 1244 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Rcn2Q8BP92 320 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Scyl2Q8CFE4 930 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Trmt112Q9DCG9 125 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 A0A1W2P6Q8 802 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm9048A0A1W2P7H4 802 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 A0A1W2P7Z8 802 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gm9046A0A1W2P855 802 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 MycP01108 439 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Slc12a2P55012 1205 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Lrriq3Q14DL3 633 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Trim21Q62191 470 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gpr101Q80T62 511 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Osbpl2Q8BX94 484 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Flt1P35969 1333 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Bpifb4A2BGH0 617 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ccdc174Q3U155 467 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Fbxo11Q7TPD1 930 aaKnown RBP17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Clasp2Q8BRT1 1286 aaKnown RBP17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Nlrp5Q9R1M5 1163 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 C130026I21RikQ8C898 291 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ttc27Q8CD92 847 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Vps37bQ8R0J7 285 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Efcc1Q9JJF6 558 aa17.57■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Cep170bQ80U49 1574 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ift81O35594 676 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 IkbkgO88522 412 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Xrcc6P23475 608 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Kctd1Q5M956 257 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Nup58Q8R332 587 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Sh2b1Q91ZM2 756 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Cst12Q9DAN8 128 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 MesdQ9ERE7 224 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ppp2r5cQ60996 524 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Madcam1Q61826 405 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 MarsQ68FL6 902 aaKnown RBP17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Retreg2Q6NS82 541 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 QarsQ8BML9 775 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gdap1O88741 358 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ftl1P29391 183 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Nxf2Q4ZGD8 691 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Gas7Q60780 421 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Scaf8Q6DID3 1268 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 AbraQ8BUZ1 375 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Defb15Q8R2I5 79 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Dynll2Q9D0M5 89 aa17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Scyl1Q9EQC5 806 aaKnown RBP17.56■□□□□ 0.4
Pcdh1-203ENSMUST00000160721 Ccdc78D3Z5T1 437 aa17.56■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms