RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 MslnlQ8C160 685 aa25.85■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Pspc1Q8R326 523 aaKnown RBP25.85■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Bub1bQ9Z1S0 1052 aa25.85■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Homer1Q9Z2Y3 366 aa25.85■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Skint3A7TZF0 458 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Rexo5D3YW29 759 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Lamp1P11438 406 aaKnown RBP25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Adamts19P59509 1210 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Trmt1Q3TX08 663 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Vgll2Q8BGW8 322 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Gprasp2Q8BUY8 826 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Morc2bQ8C5W4 1022 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Ccdc150Q8CDI7 1110 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Onecut3Q8K557 490 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Krt23Q99PS0 422 aa25.84■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Btn2a2A4QPC6 514 aa25.83■■□□□ 1.73
Scn1b-201ENSMUST00000098548 GabpaQ00422 454 aa25.83■■□□□ 1.73
Scn1b-201ENSMUST00000098548 DSCC1Q14AI0 399 aa25.83■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Kcnj14Q8JZN3 434 aa25.83■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Tob2Q9JM55 345 aa25.83■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Tjp3Q9QXY1 905 aa25.83■■□□□ 1.73
Scn1b-201ENSMUST00000098548 Scn3aA2ASI5 1947 aa25.83■■□□□ 1.73
Scn1b-201ENSMUST00000098548 NefhP19246 1090 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Tyro3P55144 880 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Usp25P57080 1055 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 MycbpapQ5SUV2 932 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Stxbp3Q60770 592 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Rnf214Q8BFU3 668 aaKnown RBP25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Rec8Q8C5S7 591 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 MyocdQ8VIM5 935 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Lmbr1Q9JIT0 490 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Add3Q9QYB5 706 aaKnown RBP25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Acot9Q9R0X4 439 aaKnown RBP25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Gm5114W4VSN8 858 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Kansl1lQ5DTI6 991 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Foxn1Q61575 648 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 PigsQ6PD26 555 aaKnown RBP25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Mbtps2Q8CHX6 515 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Trim29Q8R2Q0 587 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Nr3c2Q8VII8 978 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Bco2Q99NF1 532 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 NenfQ9CQ45 171 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Utp3Q9JI13 469 aaKnown RBP25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Rcan3Q9JKK0 239 aa25.82■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Ppp1r9aH3BJD6 1292 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Api5O35841 504 aaKnown RBP25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Epha2Q03145 977 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Trappc10Q3TLI0 1259 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Gba2Q69ZF3 918 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Siglec10Q80ZE3 688 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Oxnad1Q8VE38 311 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 ArcQ9WV31 396 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Disp2Q8CIP5 1345 aa25.81■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Gm42688A0A0R3P9D1 673 aa25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Dnaaf5B9EJR8 853 aa25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Micall1Q8BGT6 870 aa25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Sec62Q8BU14 398 aaKnown RBP25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Zhx2Q8C0C0 836 aaKnown RBP25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Ccdc142Q8CAI1 738 aa25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Plcg2Q8CIH5 1265 aa25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Snap47Q8R570 413 aa25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Snw1Q9CSN1 536 aaKnown RBP25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Hmgn5Q9JL35 406 aa25.8■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Ulk4Q3V129 1303 aa25.79■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Adgra2Q91ZV8 1336 aa25.79■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Dnajb6O54946 365 aa25.79■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Atp1a3Q6PIC6 1013 aa25.79■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Pgrmc2Q80UU9 217 aaKnown RBP25.79■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Fez1Q8K0X8 392 aa25.79■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Calml3Q9D6P8 149 aa25.79■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Fbln1Q08879 705 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Ptger2Q62053 362 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 RadxQ8C779 850 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Itm2cQ91VK4 269 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Chd1lQ9CXF7 900 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 AllcQ9JHX6 414 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Skint7A7XV04 395 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Cspp1B2RX88 1205 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Stx1aO35526 288 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Kcna1P16388 495 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Oxr1Q4KMM3 866 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Pla2g4eQ50L42 875 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Snx13Q6PHS6 957 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Olfml1Q8BSH2 233 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 SltmQ8CH25 1031 aaKnown RBP25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Hnrnpul1Q8VDM6 859 aaKnown RBP25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Traf7Q922B6 594 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Tfcp2Q9ERA0 502 aa25.78■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Tex13cD3YU32 604 aa25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Zkscan7E9PVW1 718 aa25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Peg10Q7TN75 958 aaKnown RBP25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Rtp1Q8C8C1 263 aa25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Cdan1Q8CC12 1239 aa25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Depdc1aQ8CIG0 804 aa25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 IkQ9Z1M8 557 aaKnown RBP25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 Psmd10Q9Z2X2 231 aa25.77■■□□□ 1.72
Scn1b-201ENSMUST00000098548 B020004C17RikJ3QP07 232 aa25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Traf1P39428 409 aa25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Cfap157Q0VFX2 523 aa25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Rhpn1Q61085 643 aa25.76■■□□□ 1.71
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms