RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Gpc5Q8CAL5 572 aa9.85□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Nudt8Q9CR24 210 aa9.85□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Rnf14Q9JI90 485 aa9.85□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Msgn1Q9JK54 188 aa9.85□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Arid3bQ9Z1N7 568 aa9.85□□□□□ -0.83
Scn8a-202ENSMUST00000096198 AcacbE9Q4Z2 2448 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Speer4dL7N216 212 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Phka1P18826 1241 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Etv6P97360 485 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Eme2Q56A04 373 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Jak2Q62120 1129 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Exoc8Q6PGF7 716 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Zbtb49Q8BXX2 756 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Tceal5Q8CCT4 200 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Smc4Q8CG47 1286 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Mtnr1bQ8CIQ6 364 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Traf3ip2Q8N7N6 555 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Pcdhac2Q91Y09 1006 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Srgap1Q91Z69 1062 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Mkrn2Q9ERV1 416 aaKnown RBP9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 DgkeQ9R1C6 564 aa9.84□□□□□ -0.83
Scn8a-202ENSMUST00000096198 Rad50P70388 1312 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 TnksQ6PFX9 1320 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 FAM186AQ9D9R9 1790 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Dsg3O35902 993 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 PdgfbP31240 241 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Qrich1Q3UA37 777 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Elf1Q60775 612 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Prm3Q62100 101 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Zfp943Q6NZP4 507 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Q7TT23 1179 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Ttll4Q80UG8 1193 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Gtf2a2Q80ZM7 109 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Aldh8a1Q8BH00 487 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Pi15Q8BS03 258 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Vmn1r191Q8K4D0 298 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Ushbp1Q8R370 680 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Tcf25Q8R3L2 676 aaKnown RBP9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Ophn1Q99J31 802 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Styxl1Q9DAR2 321 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Hic1Q9R1Y5 733 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Epb41l3Q9WV92 929 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Bag6Q9Z1R2 1154 aaKnown RBP9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Ccne2Q9Z238 404 aa9.83□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Prl3d2F6R3P9 224 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Gnrh1P13562 90 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Acvr2bP27040 536 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Hoxc10P31257 342 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Grm8P47743 908 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 LmnaP48678 665 aaKnown RBP9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Bend3Q6PAL0 825 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 NfrkbQ6PIJ4 1296 aaKnown RBP9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Cdkn2aipQ8BI72 563 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Bnc2Q8BMQ3 1127 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Apbb1ipQ8R5A3 670 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 1700018B08RikQ9DA83 213 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Usp14Q9JMA1 493 aaKnown RBP9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 InsrrQ9WTL4 1300 aa9.82□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Myo9aQ8C170 2542 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Pnpla6Q3TRM4 1355 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Dhx16G3X8X0 1044 aaKnown RBP9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Gm4340L7N2C4 268 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Kcnj6P48542 425 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Fscn1Q61553 493 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 OcrlQ6NVF0 900 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Mcph1Q7TT79 822 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Q8BHR8 331 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Ccdc15Q8C9M2 810 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Myl6bQ8CI43 207 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Ndufv1Q91YT0 464 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Zmynd10Q99ML0 440 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Ascl3Q9JJR7 174 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Pla2g2fQ9QZT4 168 aa9.81□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Tlk2O55047 718 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Trdmt1O55055 415 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Fgfr2P21803 821 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Aifm3Q3TY86 605 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Brip1Q5SXJ3 1174 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 HellsQ60848 821 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Nlrp9bQ66X22 1003 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Serpinb13Q8CDC0 389 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Defb15Q8R2I5 79 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Trpm5Q9JJH7 1158 aa9.8□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Cfap54Q8C6S9 3106 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Barx2O08686 283 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Flot1O08917 428 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 AppP12023 770 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Wdr44Q6NVE8 915 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Peg10Q7TN75 958 aaKnown RBP9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Pgrmc2Q80UU9 217 aaKnown RBP9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Pramel6Q810Y9 485 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Cwf19l2Q8BG79 887 aaKnown RBP9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Fut11Q8BHC9 489 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Taf15Q8BQ46 557 aaKnown RBP9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Scfd2Q8BTY8 684 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Aldh5a1Q8BWF0 523 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Fermt2Q8CIB5 680 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Cwh43Q91YL7 699 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Xrcc4Q924T3 326 aa9.79□□□□□ -0.84
Scn8a-202ENSMUST00000096198 Fuca2Q99KR8 461 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms