RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 AW822073A0A0N4SUK1 652 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Mmrn2A6H6E2 943 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Lrrc36Q3V0M2 755 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Psmd6Q99JI4 389 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Adgrb3Q80ZF8 1522 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 P3h4Q8K2B0 443 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Pcdha12Q91Y18 950 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cct6aP80317 531 aaKnown RBP11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Rab11fip4Q8BQP8 635 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Lrrc8cQ8R502 803 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tekt2Q922G7 430 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cdca7Q9D0M2 382 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Pdzd9Q9D9M4 266 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 FancaQ9JL70 1439 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Zrsr1Q64707 428 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Vat1lQ80TB8 417 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Mettl5Q8K1A0 209 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cdk12Q14AX6 1484 aaKnown RBP11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tnnc2P20801 160 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 GnptabQ69ZN6 1235 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Prdm2A2A7B5 1709 aaKnown RBP11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 1700113H08RikE9Q9Q5 327 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Atf2P16951 487 aaKnown RBP11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Xrcc5P27641 732 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Basp1Q91XV3 226 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Smc6Q924W5 1097 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Gm43638A0A0J9YU36 694 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Adcy8P97490 1249 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Utp11Q9CZJ1 253 aaKnown RBP11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Gm9774A0A0A6YVU8 407 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ptpn14Q62130 1189 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Rint1Q8BZ36 792 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 HscbQ8K3A0 234 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Eif3cQ8R1B4 911 aaKnown RBP11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Bzw1Q9CQC6 419 aaKnown RBP11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Dpp7Q9ET22 506 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ccdc92bQ5SUE3 299 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 CacybpQ9CXW3 229 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Bin2D3Z6Q9 489 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 VrtnQ3SYK4 740 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Pank4Q80YV4 820 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ccdc50Q810U5 305 aaKnown RBP11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Rpap2Q8VC34 614 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Usp32F8VPZ3 1604 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 RcvrnP34057 202 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ppp1r7Q3UM45 361 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Rabep2Q91WG2 554 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Myh6Q02566 1938 aaKnown RBP11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Setd1bQ8CFT2 1985 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ccdc78D3Z5T1 437 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Rnaseh1O70338 285 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Osbpl1aQ91XL9 950 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Nuf2Q99P69 463 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Saal1Q9D2C2 474 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ror2Q9Z138 944 aa11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Usp42B2RQC2 1324 aaKnown RBP11.4□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Chd4Q6PDQ2 1915 aaKnown RBP11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Pgrmc1O55022 195 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Ehd2Q8BH64 543 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Atf5O70191 283 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Tmod1P49813 359 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Prkab2Q6PAM0 271 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 D130040H23RikQ8BII3 405 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Caps2Q8BUG5 550 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Ccdc169Q8BXX9 214 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Abcc4E9Q236 1325 aa11.4□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Enox2Q8R0Z2 598 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Tubgcp2Q921G8 905 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 SmtnQ921U8 923 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Pacsin2Q9WVE8 486 aaKnown RBP11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Hmgb3O54879 200 aaKnown RBP11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Ftl2P49945 183 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Rasa3Q60790 834 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Q80ZQ3 298 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Klhl38Q8BSF5 581 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Ivns1abpQ920Q8 642 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 1700109H08RikQ9D9C0 210 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Arl6ip4Q9JM93 229 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Krt87Q6IMF0 495 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Foxp4Q9DBY0 795 aaKnown RBP11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Mroh9G5E8L9 891 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Dtnbp1Q91WZ8 352 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 MefvQ9JJ26 767 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 OtulinQ3UCV8 352 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Ehd4Q9EQP2 541 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Syngap1F6SEU4 1340 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 MarsQ68FL6 902 aaKnown RBP11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Me3Q8BMF3 604 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Nod2Q8K3Z0 1020 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Zfyve19Q9DAZ9 389 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Col1a2Q01149 1372 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Ankrd45Q810N6 248 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Eps8l1Q8R5F8 716 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 1700020D05RikQ99PB1 294 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Med7Q9CZB6 233 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Stx17Q9D0I4 301 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Serpinb3bQ9D1Q5 387 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Sec23ipQ6NZC7 998 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Cxcl11Q9JHH5 100 aa11.39□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Eif6O55135 245 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 66.2 ms