RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Suclg2Q9Z2I8 433 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Zbtb40Q6PCS8 1258 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Asap2Q7SIG6 958 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pih1h3bQ8C6P5 218 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Riox2Q8CD15 465 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cyth1Q9QX11 398 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 AlkP97793 1621 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm5936A2BG95 728 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm5640A3KG49 728 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Esr2O08537 530 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 XlrP05531 208 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Atp8a1P70704 1164 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 NxnP97346 435 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rnf207Q3V3A7 635 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Krt74Q6IFZ9 495 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Lrrc8cQ8R502 803 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Fam114a2Q8VE88 497 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Aox4Q3TYQ9 1336 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Kcnk16G5E845 292 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cnga4Q3UW12 575 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Zbtb7bQ64321 544 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Spata4Q8K3V1 295 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 CacybpQ9CXW3 229 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ube3bQ9ES34 1070 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dnajb7Q9QYI8 312 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Abca5Q8K448 1642 aa10.25□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Lnx1O70263 728 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Olfr118Q7TRJ6 321 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ccdc169Q8BXX9 214 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 BlvraQ9CY64 295 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Usp42B2RQC2 1324 aaKnown RBP10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm28042B7ZCM9 1014 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Tnni3P48787 211 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Mum1l1Q4VA55 681 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cnot10Q8BH15 744 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 VmacQ8BP01 174 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ror2Q9Z138 944 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 FancaQ9JL70 1439 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Myo1aO88329 1043 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Mdh1P14152 334 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Tshz1Q5DTH5 1084 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gbp5Q8CFB4 590 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Creb3l3Q91XE9 479 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dhx58Q99J87 678 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Stx12Q9ER00 274 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dctpp1Q9QY93 170 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 SphkapQ6NSW3 1687 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gm1661E9Q963 441 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Foxd4Q60688 444 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rassf6Q80UQ2 353 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 PaoxQ8C0L6 504 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Taf12Q8VE65 161 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Wbp11Q923D5 641 aaKnown RBP10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Drc3Q9D5E4 523 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Eif2ak4Q9QZ05 1648 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Nup62clA2AG10 272 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Apol11aE9PZG0 334 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dzip3Q7TPV2 1204 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ppfia4B8QI36 1187 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Zbtb7aO88939 569 aaKnown RBP10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ctnnd1P30999 938 aaKnown RBP10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 ClgnP52194 611 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dpp8Q80YA7 892 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Efcc1Q9JJF6 558 aa10.24□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 AsphQ8BSY0 741 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ccdc87Q8CDL9 855 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ushbp1Q8R370 680 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Riok3Q9DBU3 519 aaKnown RBP10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Fdx1P46656 188 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 S100a5P63084 93 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Slc8a1P70414 970 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Yipf3Q3UDR8 347 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cep104Q80V31 926 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Lrrc41Q8K1C9 807 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Abhd8Q8R0P8 439 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Spdl1Q923A2 608 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Tfap4Q9JIZ5 338 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rsbn1lD3Z0K6 821 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pcdhb9E9Q5G2 828 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Card10P58660 1021 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dab2P98078 766 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Arhgef1Q61210 920 aaKnown RBP10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Znf219Q6IQX8 726 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Trim60Q8VI40 466 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Smc6Q924W5 1097 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Krt24A1L317 512 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Fyb2A2A995 729 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Nlrp4cQ3TKR3 982 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cog7Q3UM29 770 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Slc30a9Q5IRJ6 567 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Luc7l3Q5SUF2 432 aaKnown RBP10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Krt87Q6IMF0 495 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cep70Q6IQY5 616 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Homer2Q9QWW1 354 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 AceP09470 1312 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ccdc78D3Z5T1 437 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dok7Q18PE0 504 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cracr2aQ3UP38 310 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Stxbp3Q60770 592 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Aggf1Q7TN31 711 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms