RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Plekha7Q3UIL6 1118 aaKnown RBP12.74□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Madcam1Q61826 405 aa12.74□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Ptf1aQ9QX98 324 aa12.74□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Rbm6S4R1W5 1118 aaKnown RBP12.74□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Dhx8A2A4P0 1244 aaKnown RBP12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Ugt1a6bK9J7B2 531 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Slc9a1Q61165 820 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 E2f5Q61502 335 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Ugt1a6Q64435 531 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Ugt1a7cQ6ZQM8 531 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Pde5aQ8CG03 865 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Tfap4Q9JIZ5 338 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Stk11Q9WTK7 436 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Scn9aQ62205 1984 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 1700003F12RikA2AKE5 210 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Tbc1d2B1AVH7 922 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Zscan18E9PUD6 809 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Kif2aP28740 705 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Krt39Q6IFX4 482 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Ulbp1Q8HWA3 334 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 GzmnQ920S1 248 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Trmt112Q9DCG9 125 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Sel1lQ9Z2G6 790 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Col4a5Q63ZW6 1691 aa12.73□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Cpsf2O35218 782 aaKnown RBP12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Ddx41Q91VN6 622 aaKnown RBP12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Tab2Q99K90 693 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Paip2Q9D6V8 124 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Akap8Q9DBR0 687 aaKnown RBP12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Mtmr2Q9Z2D1 643 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Eef2P58252 858 aaKnown RBP12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Map3k12Q60700 888 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Zbtb39Q6PDK0 712 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Sass6Q80UK7 654 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Rasgrp4Q8BTM9 673 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Caps2Q8BUG5 550 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Ppme1Q8BVQ5 386 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Sox30Q8CGW4 782 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Spire2Q8K1S6 718 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Znf24Q91VN1 368 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Arpp21Q9DCB4 807 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Sgpp1Q9JI99 430 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Snx1Q9WV80 522 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Cyp2ab1S4R196 498 aa12.72□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Gm5134E9QAB5 671 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Nsrp1Q5NCR9 542 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Arhgef2Q60875 985 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 CtcfQ61164 736 aaKnown RBP12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Fam196bQ6GQV1 535 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Shtn1Q8K2Q9 631 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Krtap5-3Q9D226 196 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Calml3Q9D6P8 149 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 AllcQ9JHX6 414 aa12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Togaram1Q6A070 1776 aaKnown RBP12.71□□□□□ -0.37
Ddx55-201ENSMUST00000071057 Usp17lbE9Q9U0 468 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Vmn2r68L7N2B3 851 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cd151O35566 253 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Pla2g4bP0C871 782 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 GnaqP21279 359 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nr5a1P33242 462 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cacnb3P54285 484 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Pla2g4eQ50L42 875 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tm4sf1Q64302 202 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cep128Q8BI22 1102 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cc2d1bQ8BRN9 848 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nat10Q8K224 1024 aaKnown RBP12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 LpxnQ99N69 386 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nr2e3Q9QXZ7 395 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Irx4Q9QY61 515 aa12.71□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ecm29Q6PDI5 1840 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ces1aE9PYP1 563 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Tmem132bF7BAB2 1078 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 MthfslL7N466 203 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Trim30aP15533 496 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Klhl30Q8C3F7 581 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Sapcd2Q9D818 391 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Myoz2Q9JJW5 264 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Klrc1Q9Z202 244 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Psmd10Q9Z2X2 231 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Fam186bD3Z420 943 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Slc39a2G3X943 309 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mboat4P0C7A3 435 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Thrap3Q569Z6 951 aaKnown RBP12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Soat1Q61263 540 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Pip5kl1Q6U7H8 395 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Dpp8Q80YA7 892 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Trmt2aQ8BNV1 574 aaKnown RBP12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ankk1Q8BZ25 745 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Xrcc4Q924T3 326 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Trim42Q9D2H5 723 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Cbx6Q9DBY5 414 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gm11983V9GXS8 105 aa12.7□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Pabpc1lA2A5N3 607 aaKnown RBP12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Palm3A2TJV2 734 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Kif3cO35066 796 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Rb1P13405 921 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Large2Q5XPT3 690 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Fam210aQ8BGY7 273 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Dnaaf4Q8R368 420 aa12.69□□□□□ -0.38
Ddx55-201ENSMUST00000071057 NefhP19246 1090 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms