RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Rpap2Q8VC34 614 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm21117A0A087WPJ9 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm20820A0A087WPP3 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm20937A0A087WQA3 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm21258A0A087WQC7 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm28102A0A087WQL3 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm21095A0A087WR14 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm21488A0A087WR99 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm21497A0A087WRK3 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm28576A0A087WRP6 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm21294A0A087WS79 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm20824A0A087WS97 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm20911A0A087WSS0 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm28870A0A0A6YW38 222 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm45233A0A0N4SVE0 221 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 TecP24604 630 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ptk2P34152 1090 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 RasefQ5RI75 627 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Wdr44Q6NVE8 915 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cct8l1Q80YT3 562 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 4933430I17RikQ8BHW4 495 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dnai1Q8C0M8 701 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Morc1Q9WVL5 950 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Setdb1O88974 1307 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Lonrf2B2RT44 518 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 TazI7HJS2 263 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dync1i1O88485 628 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nap1l2P51860 460 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Arf5P84084 180 aaKnown RBP9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Hsdl2Q2TPA8 490 aaKnown RBP9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rrp36Q3UFY0 244 aaKnown RBP9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Bag1Q60739 355 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ubash3bQ8BGG7 638 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cdc23Q8BGZ4 597 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Lyve1Q8BHC0 318 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Galnt13Q8CF93 556 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gas2l1Q8JZP9 678 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Med4Q9CQA5 270 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Taf8Q9EQH4 308 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm29866A0A0A6YX04 222 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Card9A2AIV8 536 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Akap2O54931 893 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Casp14O89094 257 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Npr1P18293 1057 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 NficP70255 439 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ncbp1Q3UYV9 790 aaKnown RBP9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Stard3Q61542 446 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nudcd1Q6PIP5 582 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Letm2Q7TNU7 480 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 C2cd5Q7TPS5 1016 aaKnown RBP9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dis3lQ8C0S1 1053 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Plekha4Q8VC98 588 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Kdm4bQ91VY5 1086 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Prkag2Q91WG5 566 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 XpotQ9CRT8 963 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mei1Q9D4I2 1268 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rnf25Q9QZR0 456 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Bfsp1A2AMT1 669 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Kif6E9PX57 802 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 MarcksP26645 309 aaKnown RBP9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Coq7P97478 217 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tcp11Q01755 566 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Map3k9Q3U1V8 1077 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gas8Q60779 478 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Brinp2Q6DFY8 783 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Acap3Q6NXL5 833 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Fgd5Q80UZ0 1219 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rnf103Q9R1W3 683 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mybl2P48972 704 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Csrnp1P59054 583 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nfe2l2Q60795 597 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sh3gl2Q62420 352 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tmc6Q7TN60 810 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tmem266Q8BZB3 538 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 9230110C19RikQ8CC70 267 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Acsbg1Q99PU5 721 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cnbd2Q9D5U8 673 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Phkg2Q9DB30 406 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Lekr1B2RVN1 116 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Barx2O08686 283 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Arhgef16Q3U5C8 713 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ces5aQ6AW46 575 aa9.82□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Fam81bA0A140LI28 432 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Esp31A8R0W3 114 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3264L7N2C5 238 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 PlaaP27612 794 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ranbp1P34022 203 aaKnown RBP9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 PhkbQ7TSH2 1085 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tmem63cQ8CBX0 802 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Phc3Q8CHP6 981 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Q9DAQ4 598 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 GmfgQ9ERL7 142 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rasgrp2Q9QUG9 608 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Pld1Q9Z280 1074 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Map7d3A2AEY4 876 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm6583E9Q8Z1 469 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sema3aO08665 772 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 NfiaQ02780 532 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Znf280cQ6P3Y5 742 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Zbed4Q80WQ9 1168 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms