RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Ptger2Q62053 362 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Peg10Q7TN75 958 aaKnown RBP21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Gpcpd1Q8C0L9 675 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Depdc1aQ8CIG0 804 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Kcnc4Q8R1C0 628 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Oxnad1Q8VE38 311 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Bloc1s2Q9CWG9 143 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Alpk1Q9CXB8 1231 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Ubiad1Q9DC60 336 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Azi2Q9QYP6 405 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Psmd10Q9Z2X2 231 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Homer1Q9Z2Y3 366 aa21.32■■□□□ 1
Vti1b-201ENSMUST00000055262 Gm13128L7MU96 475 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Kifap3P70188 793 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 MycbpapQ5SUV2 932 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Brd2Q7JJ13 798 aaKnown RBP21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Usp17leQ7M764 540 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 GlmnQ8BZM1 596 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 RadxQ8C779 850 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Trim32Q8CH72 655 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Lrrc2Q8VDB8 371 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Ivns1abpQ920Q8 642 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Mrpl44Q9CY73 333 aaKnown RBP21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Tob2Q9JM55 345 aa21.31■■□□□ 1
Vti1b-201ENSMUST00000055262 Zgrf1Q0VGT4 1863 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Rabgap1A2AWA9 1064 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Dnaaf5B9EJR8 853 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Gm15448F6PZL4 682 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Lig1P37913 916 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Stim2P83093 746 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Ppm1jQ149T7 507 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Cfap52Q5F201 620 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Arhgef2Q60875 985 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Churc1Q6DG52 112 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Aoc2Q812C9 757 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Me3Q8BMF3 604 aa21.3■■□□□ 1
Vti1b-201ENSMUST00000055262 Catsper2A2ARP9 588 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Parp2O88554 559 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Ly6dP35459 127 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Map4k1P70218 827 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Gdf10P97737 476 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Srrm1Q52KI8 946 aaKnown RBP21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Ecm1Q61508 559 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Nek9Q8K1R7 984 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 CerkQ8K4Q7 531 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Ipo9Q91YE6 1041 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 ZwintQ9CQU5 252 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 Spint1Q9R097 507 aa21.29■■□□□ 1
Vti1b-201ENSMUST00000055262 MthfslL7N466 203 aa21.28■■□□□ 1
Vti1b-201ENSMUST00000055262 Nck2O55033 380 aa21.28■■□□□ 1
Vti1b-201ENSMUST00000055262 CatspereP0DP43 985 aa21.28■■□□□ 1
Vti1b-201ENSMUST00000055262 Gjb1P28230 283 aa21.28■■□□□ 1
Vti1b-201ENSMUST00000055262 Zfp90Q61967 636 aa21.28■■□□□ 1
Vti1b-201ENSMUST00000055262 Znf784Q8BI69 297 aa21.28■■□□□ 1
Vti1b-201ENSMUST00000055262 Dlk2Q8K1E3 382 aa21.28■■□□□ 1
Vti1b-201ENSMUST00000055262 Ankrd35E9Q9D8 996 aa21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 Rad51bO35719 350 aa21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 Nf2P46662 596 aa21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 Hmgcs2P54869 508 aa21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 Fbxo11Q7TPD1 930 aaKnown RBP21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 Fbxo10Q7TQF2 950 aa21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 Terf2ipQ91VL8 393 aa21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 Slc5a5Q99PN0 618 aa21.27■■□□□ 1
Vti1b-201ENSMUST00000055262 TrdnE9Q9K5 693 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Cyp3a25O09158 503 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 TxnP10639 105 aaKnown RBP21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 PRAG1Q571I4 1179 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Slc27a1Q60714 646 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Vps37dQ810I0 261 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 TbcbQ9D1E6 244 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Sh2b2Q9JID9 621 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Tmem191cQ9JJB1 302 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Arih1Q9Z1K5 555 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Sbf2E9PXF8 1872 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Zfp804bA0A0G2JGH6 1343 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Pabpc1lA2A5N3 607 aaKnown RBP21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Kcna1P16388 495 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Map2k1P31938 393 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Gcnt1Q09324 428 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 YdjcQ14BV6 310 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Zkscan1Q8BGS3 561 aaKnown RBP21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Dpp9Q8BVG4 862 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Onecut3Q8K557 490 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Plekha4Q8VC98 588 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Nlrp5Q9R1M5 1163 aa21.26■□□□□ 0.99
Vti1b-201ENSMUST00000055262 LyarQ08288 388 aaKnown RBP21.25■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Tpd52Q62393 224 aa21.25■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Taok2Q6ZQ29 1240 aa21.25■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Nim1kQ8BHI9 436 aa21.25■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Galntl5Q9D4M9 431 aa21.25■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Fam71e1A1L3C1 212 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Zbtb21E9Q444 1094 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Cst8P32766 142 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Pla2g6P97819 807 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Oxr1Q4KMM3 866 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Kiaa1211Q5PR69 1207 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Evc2Q8K1G2 1220 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Tesk2Q8VCT9 570 aa21.24■□□□□ 0.99
Vti1b-201ENSMUST00000055262 Wfdc16A2A5H4 111 aa21.23■□□□□ 0.99
Vti1b-201ENSMUST00000055262 C87977A2A958 498 aa21.23■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms