RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Gm7347D3YYI9 267 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Tcp1P11983 556 aaKnown RBP16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Wdr70Q3TWF6 657 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Hirip3Q8BLH7 601 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Themis2Q91YX0 663 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Syce1Q9D495 329 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Ttc13A0A1L1SSC7 844 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Nfxl1E9Q8I7 918 aaKnown RBP16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Slc39a2G3X943 309 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Ccdc33Q3ULW6 985 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Cabp7Q91ZM8 215 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Prpf3Q922U1 683 aaKnown RBP16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Asic2Q925H0 512 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Smtnl1Q99LM3 459 aa16.78■□□□□ 0.28
Usp4-201ENSMUST00000035237 Scgb2b19J3QM75 112 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Tex35Q14BK3 207 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Pak2Q8CIN4 524 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Q8K2W9 541 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Tacc2Q9JJG0 1149 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Robo1O89026 1612 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Spocd1B1ASB6 936 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Slc30a9Q5IRJ6 567 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Tsg101Q61187 391 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Fxr1Q61584 677 aaKnown RBP16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 PnocQ64387 187 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Tcp10aQ80W76 438 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Saal1Q9D2C2 474 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Igsf9bE9PZ19 1328 aa16.77■□□□□ 0.28
Usp4-201ENSMUST00000035237 Clcn6O35454 870 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 Atp6v1aP50516 617 aaKnown RBP16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 HelqQ2VPA6 1069 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 Specc1Q5SXY1 1067 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 Cep131Q62036 1060 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 QarsQ8BML9 775 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 Tmem134Q8R0J4 195 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 SncbQ91ZZ3 133 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 Letm1Q9Z2I0 738 aa16.77■□□□□ 0.27
Usp4-201ENSMUST00000035237 Hnrnph1O35737 449 aaKnown RBP16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Abcb4P21440 1276 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 GscQ02591 256 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Exoc3Q6KAR6 755 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ppp2r5bQ6PD28 497 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Lrrn2Q6PHP6 730 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Myo1hQ9D6A1 958 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Akap8Q9DBR0 687 aaKnown RBP16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Prl2c3P04768 224 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Pbx1P41778 430 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Gas8Q60779 478 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Mis12Q9CY25 206 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Gm5134E9QAB5 671 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ctnnd1P30999 938 aaKnown RBP16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 BcrQ6PAJ1 1270 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 HhatQ8BMT9 499 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Zbtb1Q91VL9 713 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Efhd1Q9D4J1 240 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ubxn8Q9QZ49 277 aa16.76■□□□□ 0.27
Usp4-201ENSMUST00000035237 N4bp2F8VQG7 1678 aaKnown RBP16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Gm4307E9PZY4 289 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Gm4312K9J7E2 289 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Jmjd4Q8BFT6 427 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 AbraQ8BUZ1 375 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ddx54Q8K4L0 874 aaKnown RBP16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Apol6B7ZC55 329 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Arhgap6O54834 987 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Tnnc1P19123 161 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Gna15P30678 374 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Hnrnph2P70333 449 aaKnown RBP16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Q91WD4 421 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Q3TYL0 343 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Drc1Q3USS3 753 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ice2Q3UZ18 988 aaKnown RBP16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Adck2Q6NSR3 617 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Lrrc41Q8K1C9 807 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Abhd2Q9QXM0 425 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ulk4Q3V129 1303 aa16.75■□□□□ 0.27
Usp4-201ENSMUST00000035237 Fbf1A2A870 1173 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Tcerg1lQ3B807 590 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Efcab14Q8BGQ6 484 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 PdiltQ9DAN1 588 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Sept3Q9Z1S5 350 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Art2aP17981 287 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Kcna6Q61923 529 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Antxr2Q6DFX2 487 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Micall1Q8BGT6 870 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Zfp446Q8C9M8 523 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Vcpip1Q8CDG3 1220 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Gdap1O88741 358 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Fkbp3Q62446 224 aaKnown RBP16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ccdc25Q78PG9 208 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Atp6v0a4Q920R6 833 aa16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ssr1Q9CY50 286 aaKnown RBP16.74■□□□□ 0.27
Usp4-201ENSMUST00000035237 Ifnar1P33896 590 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 Papd7Q6PB75 542 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 Phf8Q80TJ7 1023 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 Q8BWG4 1187 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 Skor1Q8BX46 964 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 NalcnQ8BXR5 1738 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 Shank2Q80Z38 1476 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 Q32P12 615 aa16.73■□□□□ 0.27
Usp4-201ENSMUST00000035237 Spata5Q3UMC0 893 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms