RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Usp44Q8C2S0 711 aa20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Eif4a3Q91VC3 411 aaKnown RBP20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Mum1l1Q4VA55 681 aa20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Hps6Q8BLY7 805 aa20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Pdzd4Q9QY39 772 aa20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Krt78E9Q0F0 1068 aa20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Sept7O55131 436 aa20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Islr2Q5RKR3 745 aa20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Pabpc4Q6PHQ9 660 aaKnown RBP20.29■□□□□ 0.84
Ebf3-201ENSMUST00000033378 ErmardE9Q048 622 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Fermt3Q8K1B8 665 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Lrrc41Q8K1C9 807 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Adgrl3Q80TS3 1537 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Atp7bQ64446 1462 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Slc8a1P70414 970 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 EnahQ03173 802 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Rasgrp4Q8BTM9 673 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 AacsQ9D2R0 672 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Abcc12Q80WJ6 1366 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Nedd9O35177 833 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Smarcad1Q04692 1021 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Kcna6Q61923 529 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Gm14525B1AZA0 212 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Gm2012B1B0R1 212 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Pik3caP42337 1068 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Rtel1Q0VGM9 1203 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Slc10a4Q3UEZ8 437 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Gm10488Q4KL05 212 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Gm14819Q62478 212 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Bbs5Q9CZQ9 341 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Cep83Q9D5R3 692 aa20.28■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Vmn2r23E9PXI5 849 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Hpcal4Q8BGZ1 191 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 GlmnQ8BZM1 596 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Srgap2Q91Z67 1071 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Smc6Q924W5 1097 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Ubxn10Q8BG34 277 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 F13a1Q8BH61 732 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Rab11fip4Q8BQP8 635 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Psmc4P54775 418 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Ctnna3Q65CL1 895 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Cep104Q80V31 926 aa20.27■□□□□ 0.84
Ebf3-201ENSMUST00000033378 Myo3bQ1EG27 1305 aa20.27■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Sclt1G5E861 688 aa20.27■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Kcnk16G5E845 292 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Atp8a1P70704 1164 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Adcy8P97490 1249 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Krt87Q6IMF0 495 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Dcaf5Q80T85 946 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Daam2Q80U19 1115 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cep170Q6A065 1588 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Hmgb2P30681 210 aaKnown RBP20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Tdo2P48776 406 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Pcdhb14Q6PB90 796 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Clec16aQ80U30 1036 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 IcoslgQ9JHJ8 322 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ano3A2AHL1 981 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ddx23D3Z0M9 819 aaKnown RBP20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 LbrQ3U9G9 626 aaKnown RBP20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Tspyl4Q8VD63 406 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 KynuQ9CXF0 464 aa20.26■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Sh2d4bA6X942 431 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 MybP06876 636 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Stat5bP42232 786 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 E330017A01RikQ8BU47 192 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Stoml1Q8CI66 399 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Rbm41Q8JZV4 413 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Kansl3A2RSY1 903 aaKnown RBP20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Recql4Q75NR7 1216 aaKnown RBP20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Myef2Q8C854 591 aaKnown RBP20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Vps37bQ8R0J7 285 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ssfa2Q922B9 1252 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Vps33aQ9D2N9 598 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Il7P10168 154 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Mettl14Q3UIK4 456 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cracr2aQ3UP38 310 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Rab34Q64008 259 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Nr2e3Q9QXZ7 395 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Clcn6O35454 870 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Nek1P51954 1203 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Zbtb7bQ64321 544 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Creb3l3Q91XE9 479 aa20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 HibadhQ99L13 335 aaKnown RBP20.25■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Parp2O88554 559 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ripor2Q80U16 1078 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Pank4Q80YV4 820 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Mroh6V9GX81 722 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cpb1B2RS76 415 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cdk4P30285 303 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Zbtb16Q3UQ17 673 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Krt12Q64291 487 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Tada3Q8R0L9 432 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Tnpo2Q99LG2 887 aaKnown RBP20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Hdac6Q9Z2V5 1149 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Fdx1P46656 188 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Yars2Q8BYL4 472 aaKnown RBP20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ccdc124Q9D8X2 217 aaKnown RBP20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Msh6P54276 1358 aaKnown RBP20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Apol6B7ZC55 329 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Gm4297D3YWB7 211 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms