RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Ddx23D3Z0M9 819 aaKnown RBP11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Calm1P0DP26 149 aaKnown RBP11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Calm2P0DP27 149 aaKnown RBP11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Calm3P0DP28 149 aaKnown RBP11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Igbp1Q61249 340 aa11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tpm4Q6IRU2 248 aa11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tango6Q8C3S2 1079 aa11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Fam161bQ8CB59 589 aa11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Scrn1Q9CZC8 414 aa11.95□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Nup98Q6PFD9 1816 aaKnown RBP11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Nme9A0A1L1SUL6 329 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Fam43bA2AM80 330 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Meis3P97368 378 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ric8aQ3TIR3 530 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Plekha7Q3UIL6 1118 aaKnown RBP11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 GypcQ78HU7 95 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Brms1Q99N20 246 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Mad2l2Q9D752 211 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tpcn1Q9EQJ0 817 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Rcan1Q9JHG6 198 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Egfl6Q9JJZ5 550 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Uchl5Q9WUP7 329 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Peak1Q69Z38 1735 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Krt78E9Q0F0 1068 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Il15P48346 162 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tdo2P48776 406 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 DSCC1Q14AI0 399 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Eme2Q56A04 373 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Secisbp2lQ6A098 1086 aaKnown RBP11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Smarca1Q6PGB8 1046 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Pspc1Q8R326 523 aaKnown RBP11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Srgap2Q91Z67 1071 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 MicalclQ9D5U9 680 aa11.94□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Aox3G3X982 1335 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Arhgap33Q80YF9 1305 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 A430078G23RikE9Q7Y4 484 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 VrtnQ3SYK4 740 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Olfr121Q5CZY0 321 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Hdac4Q6NZM9 1076 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 4930550L24RikQ99PA7 320 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Fam217aQ9D9W6 419 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 DonsonQ9QXP4 560 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Epb41l3Q9WV92 929 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Zmym2Q9CU65 1376 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ano3A2AHL1 981 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Gcom1E9PZ54 550 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Nck2O55033 380 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Alppl2P24823 529 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Mcm5P49718 733 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 MyzapQ3UIJ9 466 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ccdc51Q3URS9 406 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Zbtb39Q6PDK0 712 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Rab11fip4Q8BQP8 635 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tfap4Q9JIZ5 338 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tmem47Q9JJG6 181 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 CluhQ5SW19 1315 aa11.93□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Gm3893E9Q1I1 302 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Prl2c3P04768 224 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Nf2P46662 596 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Znhit6Q3UFB2 460 aaKnown RBP11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Oxr1Q4KMM3 866 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Vil1Q62468 827 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Naif1Q6PFD7 327 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ankrd13aQ80UP5 588 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Zdhhc14Q8BQQ1 489 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Hps4Q99KG7 671 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Galntl5Q9D4M9 431 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Cd274Q9EP73 290 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Gm7356A0A087WSA6 508 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 ErmardE9Q048 622 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Enc1O35709 589 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Myo1aO88329 1043 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Lig3P97386 1015 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 PcQ05920 1178 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 LbrQ3U9G9 626 aaKnown RBP11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 FntaQ61239 377 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Calml3Q9D6P8 149 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Duox1A2AQ92 1551 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Kifc2O08672 792 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tpp1O89023 562 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Rpusd2Q149F1 553 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Znf667Q2TL60 609 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Wdr70Q3TWF6 657 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 LrmpQ60664 539 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Mtss1lQ6P9S0 715 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tmem39aQ9CYC3 486 aa11.92□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Myh13B1AR69 1938 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tal1P22091 329 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Nkx2-5P42582 318 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Tmem232Q5K6N0 675 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Sh3gl3Q62421 347 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Asic1Q6NXK8 526 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Ppp2r5bQ6PD28 497 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Jade2Q6ZQF7 829 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Map3k11Q80XI6 850 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Bbs9Q811G0 885 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Znf609Q8BZ47 1413 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Grin3bQ91ZU9 1003 aa11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Prc1Q99K43 603 aaKnown RBP11.91□□□□□ -0.5
Ptcd1-201ENSMUST00000031628 Klhl40Q9D783 621 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms