RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Adamts10P58459 1104 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Cyp2e1Q05421 493 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Wdr70Q3TWF6 657 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Rasip1Q3U0S6 961 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Zdhhc15Q8BGJ0 337 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Mrpl58Q8R035 206 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Mrpl11Q9CQF0 192 aaKnown RBP13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Lysmd1Q9D0E3 226 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Adgrf4Q9D2L6 698 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Q9D9S1 216 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Pes1Q9EQ61 584 aaKnown RBP13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Azi2Q9QYP6 405 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 IkQ9Z1M8 557 aaKnown RBP13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Homer1Q9Z2Y3 366 aa13.21□□□□□ -0.29
Ccdc28b-201ENSMUST00000030586 Ccdc88aQ5SNZ0 1873 aa13.21□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Scn3aA2ASI5 1947 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Fam71e1A1L3C1 212 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Phactr2B1AVP0 632 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Prom1O54990 867 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Me1P06801 572 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Calm1P0DP26 149 aaKnown RBP13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Calm2P0DP27 149 aaKnown RBP13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Calm3P0DP28 149 aaKnown RBP13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Ppfia3P60469 1194 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Kifap3P70188 793 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gdf10P97737 476 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Sox10Q04888 466 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Neurl1bQ0MW30 546 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Eepd1Q3TGW2 569 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gm1587Q3UT80 123 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Churc1Q6DG52 112 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Fbxo11Q7TPD1 930 aaKnown RBP13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Triml1Q8BVP1 470 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 GlmnQ8BZM1 596 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Bclaf1Q8K019 919 aaKnown RBP13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Fubp1Q91WJ8 651 aaKnown RBP13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Chmp4cQ9D7F7 232 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 AllcQ9JHX6 414 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gpaa1Q9WTK3 621 aa13.2□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Ep400Q8CHI8 3072 aaKnown RBP13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gm44511A0A0N4SW10 223 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Klrb1bP27812 223 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Irs1P35569 1233 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Cct2P80314 535 aaKnown RBP13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Esyt1Q3U7R1 1092 aaKnown RBP13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Babam1Q3UI43 333 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Ckap2Q3V1H1 664 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Crhr2Q60748 411 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Cln3Q61124 438 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Ddx4Q61496 702 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Cnga2Q62398 664 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Ranbp6Q8BIV3 1105 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Mrps27Q8BK72 415 aaKnown RBP13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 VmacQ8BP01 174 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Iws1Q8C1D8 766 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 PdgfcQ8CI19 345 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Rufy3Q9D394 469 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Cmtm5Q9D6G9 156 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Hic1Q9R1Y5 733 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Psmd10Q9Z2X2 231 aa13.19□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 C87977A2A958 498 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Magea4F2Z493 315 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gml2G5E8L7 176 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Metap2O08663 478 aaKnown RBP13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 GnaqP21279 359 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Rps6P62754 249 aaKnown RBP13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Pou2f2Q00196 463 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Ctdnep1Q3TP92 244 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Kiaa1211Q5PR69 1207 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Cdc14aQ6GQT0 603 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Mcph1Q7TT79 822 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Tpcn2Q8BWC0 731 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 RadxQ8C779 850 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gprc5cQ8K3J9 440 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Lzts2Q91YU6 671 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Tll2Q9WVM6 1012 aa13.18□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Sbf1Q6ZPE2 1867 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Pabpc1lA2A5N3 607 aaKnown RBP13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Arhgap4B1AUY3 965 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Trdmt1O55055 415 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Slc6a20bO88575 635 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Rgl1Q60695 768 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Taok2Q6ZQ29 1240 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Nxf7Q80SZ6 620 aaKnown RBP13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Pgm5Q8BZF8 567 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Zswim3Q8CFL8 695 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Stard7Q8R1R3 373 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Slc12a8Q8VI23 705 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Prkag2Q91WG5 566 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 BrapQ99MP8 591 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 LlphQ9D945 130 aaKnown RBP13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Tbx20Q9ES03 445 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Dnajb2Q9QYI5 324 aa13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 PfkpQ9WUA3 784 aaKnown RBP13.17□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 RptorQ8K4Q0 1335 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gm38655A0A286YDK6 273 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gucy1a2F8VQK3 730 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Lnx1O70263 728 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 EvcP57680 1005 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Hoxa13Q62424 386 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms