RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Snrpa1P57784 255 aaKnown RBP11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 P2rx5Q3UYI1 455 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Rexo1Q7TT28 1213 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Iws1Q8C1D8 766 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Usp44Q8C2S0 711 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Enox2Q8R0Z2 598 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 LpxnQ99N69 386 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 CutaQ9CQ89 177 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Plcb1Q9Z1B3 1216 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Syde2E9PUP1 1314 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Vti1aO89116 217 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 NppbP40753 121 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ppp1r7Q3UM45 361 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Retreg2Q6NS82 541 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Spata2Q8K004 515 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Tada3Q8R0L9 432 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Prkag2Q91WG5 566 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Rreb1Q3UH06 1700 aaKnown RBP11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 1700122O11RikJ3QPW6 241 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 PhexP70669 749 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Zfp781Q0P5U5 243 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ccdc33Q3ULW6 985 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Arhgef1Q61210 920 aaKnown RBP11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ovgp1Q62010 721 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Znf76Q8BMU0 568 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ginm1Q91WR6 327 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ube3bQ9ES34 1070 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Irx1P81068 480 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Slc44a1Q6X893 653 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Tas2r124Q7M718 309 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cabs1Q8C633 391 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Trim59Q922Y2 403 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Kif1aP33173 1695 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Gm6588E9Q3K0 461 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Sval3Q76I99 144 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Slc39a6Q8C145 765 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Myef2Q8C854 591 aaKnown RBP11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ufl1Q8CCJ3 793 aaKnown RBP11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Nup58Q8R332 587 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Bag2Q91YN9 210 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Tlcd1Q99JT6 247 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ccdc175E9PVB3 822 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ppp2r5eQ61151 467 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Polr2bQ8CFI7 1174 aaKnown RBP11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Rilpl1Q9JJC6 406 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Krt71Q9R0H5 524 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 HnrnpcQ9Z204 313 aaKnown RBP11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Serpini1O35684 410 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Atp6v1aP50516 617 aaKnown RBP11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Slc30a9Q5IRJ6 567 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Kcnj14Q8JZN3 434 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Copb1Q9JIF7 953 aa11.84□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ercc5P35689 1170 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Inpp5bQ8K337 993 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Trim60Q8VI40 466 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Trim42Q9D2H5 723 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Fam217aQ9D9W6 419 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Diaph3Q9Z207 1171 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Vstm4T1NXB5 319 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Rims2Q9EQZ7 1530 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Nsun2Q1HFZ0 757 aaKnown RBP11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Myo6Q64331 1265 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Slc51bQ80WK2 128 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Slc4a7Q8BTY2 1034 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 4933406M09RikG3XA12 479 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ift81O35594 676 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Krt19P19001 403 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Cct6aP80317 531 aaKnown RBP11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Herc4Q6PAV2 1057 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Mtrf1lQ8BJU9 373 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Tgs1Q923W1 853 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Acsl3Q9CZW4 720 aaKnown RBP11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Scyl1Q9EQC5 806 aaKnown RBP11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Spef2Q8C9J3 1734 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Cnbd1B1AWM0 430 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Kiaa1468Q148V7 1216 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 HdxQ14B70 692 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Trappc10Q3TLI0 1259 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Trim21Q62191 470 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Crybg3Q80W49 1005 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Pcdha12Q91Y18 950 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 Gkap1Q9JMB0 366 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 H2-OaQ9QWV1 250 aa11.83□□□□□ -0.52
Ciita-201ENSMUST00000023147 PpardP35396 440 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Pald1P70261 859 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Krt14Q61781 484 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Camsap3Q80VC9 1252 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Cplx3Q8R1B5 158 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Cops6O88545 324 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Tnni3P48787 211 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Hspa8P63017 646 aaKnown RBP11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Eme2Q56A04 373 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ankrd45Q810N6 248 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Vps37bQ8R0J7 285 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ttc1Q91Z38 292 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 AdarQ99MU3 1178 aaKnown RBP11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Txnrd1Q9JMH6 613 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Carmil3Q3UFQ8 1375 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Rps6ka1P18653 724 aa11.82□□□□□ -0.52
Ciita-201ENSMUST00000023147 Ftl2P49945 183 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms