RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Tmod1P49813 359 aa12.79□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Casp4P70343 373 aa12.79□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Ythdf3Q8BYK6 585 aaKnown RBP12.79□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Erlin1Q91X78 346 aa12.79□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Filip1Q9CS72 1211 aa12.79□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Appbp2Q9DAX9 585 aa12.79□□□□□ -0.36
Sdc1-201ENSMUST00000020911 MetP16056 1379 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Rexo5D3YW29 759 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 VimP20152 466 aaKnown RBP12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Pfkfb1P70266 471 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 PsdQ5DTT2 1024 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Cep55Q8BT07 462 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Kdm3aQ6PCM1 1323 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Gm28510A0A087WP28 240 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Pet2A2AHY8 747 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Sec24cG3X972 1096 aaKnown RBP12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Ets2P15037 468 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Eva1cP58659 440 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Clul1Q3ZRW6 464 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Zc3h12cQ5DTV4 884 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Fchsd1Q6PFY1 688 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Ccdc82Q6PG04 518 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 AmphQ7TQF7 686 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Sugp1Q8CH02 643 aaKnown RBP12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Mrc1Q61830 1456 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Ssc5dQ8BV57 1371 aa12.78□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Tnrc6cQ3UHC0 1690 aaKnown RBP12.77□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Abl1P00520 1123 aa12.77□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Arl13bQ640N2 427 aa12.77□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Tekt3Q6X6Z7 490 aa12.77□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Rnf112Q96DY5 654 aa12.77□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Abcf2Q99LE6 628 aaKnown RBP12.77□□□□□ -0.36
Sdc1-201ENSMUST00000020911 GsdmeQ9Z2D3 512 aa12.77□□□□□ -0.36
Sdc1-201ENSMUST00000020911 Gm5624F6ZZG8 207 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Cyp2d9P11714 504 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tubb5P99024 444 aaKnown RBP12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Irak1Q62406 710 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Epn1Q80VP1 575 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tango6Q8C3S2 1079 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Usp20Q8C6M1 916 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tmem221Q8K071 230 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Coq6Q8R1S0 476 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Rsrc1Q9DBU6 334 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Nek3Q9R0A5 511 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ctnnd1P30999 938 aaKnown RBP12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Sept1P42209 366 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Abl2Q4JIM5 1182 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 RarsQ9D0I9 660 aaKnown RBP12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 IcoslgQ9JHJ8 322 aa12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Akap8lQ9R0L7 642 aaKnown RBP12.77□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Stox1B2RQL2 990 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Fam47eD3YWC7 402 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tpm3-rs7D3Z2H9 248 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ebf2O08792 575 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Alox15P39654 663 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Snrpa1P57784 255 aaKnown RBP12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ccdc160Q3UYG1 323 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Xlr3bQ6P205 226 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Asnsd1Q8BFS9 627 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 DymQ8CHY3 669 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tubb6Q922F4 447 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Riok1Q922Q2 567 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ctnnbl1Q9CWL8 563 aaKnown RBP12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Mrpl44Q9CY73 333 aaKnown RBP12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ercc4Q9QZD4 917 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Speer4dL7N216 212 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tnni2P13412 182 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tax1bp1Q3UKC1 814 aaKnown RBP12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 BrapQ99MP8 591 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Klhl40Q9D783 621 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 SelenooQ9DBC0 667 aa12.76□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Zbtb7aO88939 569 aaKnown RBP12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Pla2g4bP0C871 782 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Slc38a10Q5I012 1090 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Trim37Q6PCX9 961 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 NostrinQ6WKZ7 506 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 U2af1l4Q8BGJ9 220 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 D130040H23RikQ8BII3 405 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Ppfia2Q8BSS9 1257 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 HibchQ8QZS1 385 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Lrrc2Q8VDB8 371 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 UvssaQ9D479 717 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Tktl2Q9D4D4 627 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Trp53inp1Q9QXE4 239 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Znf394Q9Z1D9 521 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Pfkfb3A7UAK5 555 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Vmn2r23E9PXI5 849 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Pcdhb9E9Q5G2 828 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Nck2O55033 380 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Me1P06801 572 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Prl3d1P18121 224 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Pdha1P35486 390 aaKnown RBP12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 AarsQ8BGQ7 968 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Shisa4Q8CA71 197 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Phldb2Q8K1N2 1249 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 CerkQ8K4Q7 531 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Aipl1Q924K1 328 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Vwa5aQ99KC8 793 aaKnown RBP12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Pax3P24610 479 aa12.75□□□□□ -0.37
Sdc1-201ENSMUST00000020911 Cct6aP80317 531 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms