RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Kcnb1Q03717 857 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Arhgef2Q60875 985 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Usp15Q8R5H1 981 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Surf6P70279 355 aaKnown RBP13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Acbd5Q5XG73 508 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Mcm7Q61881 719 aaKnown RBP13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Cracr2bQ80ZJ8 394 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tmem60Q8K174 133 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Pspc1Q8R326 523 aaKnown RBP13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ubxn1Q922Y1 297 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 NsmfQ99NF2 532 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Coro7Q9D2V7 922 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Nol7Q9D7Z3 254 aaKnown RBP13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 EhhadhQ9DBM2 718 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Angptl3Q9R182 455 aa13.41□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Tex13cD3YU32 604 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Bnip3O55003 187 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Sema4bQ62179 823 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Usp50Q6P8X6 390 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 RadxQ8C779 850 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 LgsnQ8CIX8 563 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Hs2st1Q8R3H7 356 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 PfasQ5SUR0 1337 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Bcl9lQ67FY2 1494 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Akap2O54931 893 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Kdm7aQ3UWM4 940 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Zc3h12cQ5DTV4 884 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Cabp7Q91ZM8 215 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Prss40A6H6T1 365 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 RaraP11416 462 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ifnar1P33896 590 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Siah1aP61092 282 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Knop1Q9Z2Q2 478 aaKnown RBP13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Myh3P13541 1940 aa13.4□□□□□ -0.26
Rfx1-201ENSMUST00000005600 Ube4aE9Q735 1028 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Tmem35bQ3U0Y2 150 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Mdh1bQ5F204 500 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Cdcp1Q5U462 833 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Ncapg2Q6DFV1 1138 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Mtss1lQ6P9S0 715 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Ttll4Q80UG8 1193 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Hsd3b7Q9EQC1 369 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Bpifb4A2BGH0 617 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Otud7bB2RUR8 840 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Slc9a2Q3ZAS0 814 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Spag7Q7TNE3 227 aaKnown RBP13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Smco2Q9DA21 347 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Peg12Q9WVA7 283 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Pcdh11xF6ZNL5 1338 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 AgtP11859 477 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Rapgef3Q8VCC8 918 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Prpf6Q91YR7 941 aaKnown RBP13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Tmem192Q9CXT7 266 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Letm1Q9Z2I0 738 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 FAM186AQ9D9R9 1790 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 GnaqP21279 359 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Miga2Q8BK03 593 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Slc39a11Q8BWY7 342 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Fsip1Q9D3V5 435 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Nr2e3Q9QXZ7 395 aa13.39□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Slc39a2G3X943 309 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Nfil3O08750 462 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Hdhd2Q3UGR5 259 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Fkbp3Q62446 224 aaKnown RBP13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Mindy1Q76LS9 468 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Slfnl1Q8BHW9 410 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 TxlnbQ8VBT1 685 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Smtnl1Q99LM3 459 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Ankrd35E9Q9D8 996 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Wee1P47810 646 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 WhrnQ80VW5 918 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Rasgrp4Q8BTM9 673 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Ildr1Q8CBR1 537 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Tacc2Q9JJG0 1149 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Phlpp1Q8CHE4 1687 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Cyp2c23E9Q5K4 494 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Folh1O35409 752 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Sema3fO88632 785 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Tcp1P11983 556 aaKnown RBP13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Usp53P15975 1069 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Exoc5Q3TPX4 708 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 BcrQ6PAJ1 1270 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Traf3ip3Q8C0G2 513 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Morc2bQ8C5W4 1022 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 MlphQ91V27 590 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Dnajc17Q91WT4 303 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Alpk1Q9CXB8 1231 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Arpp21Q9DCB4 807 aa13.38□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Dnai2A2AC93 623 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Carmil2Q3V3V9 1296 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 LrmpQ60664 539 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Cep70Q6IQY5 616 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Ccdc172Q810N9 267 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Fbxo18Q8K2I9 1042 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Sipa1l3G3X9J0 1776 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Myh13B1AR69 1938 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Klra17Q9JMA4 273 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Etnk2A7MCT6 385 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Ap1g2O88512 791 aa13.37□□□□□ -0.27
Rfx1-201ENSMUST00000005600 Ankrd13cQ3UX43 541 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms