RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Rbm43Q99J64 343 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Glrx3Q9CQM9 337 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cuedc2Q9CXX9 284 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Orc3Q9JK30 715 aaKnown RBP9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Med23Q80YQ2 1367 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Klhl34A2AI76 644 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 SelenovD3YXG1 328 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 1700113H08RikE9Q9Q5 327 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 NeblQ0II04 452 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Sp4Q62445 782 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 GancQ8BVW0 898 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 4933409G03RikQ8C5U0 320 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Prpsap2Q8R574 369 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tubgcp2Q921G8 905 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Dph5Q9CWQ0 281 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 EhhadhQ9DBM2 718 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ppp1r2Q9DCL8 206 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Copb1Q9JIF7 953 aa9.99□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gm7995L7N2E4 160 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ephb4P54761 987 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pank4Q80YV4 820 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Eif3cQ8R1B4 911 aaKnown RBP9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Them5Q9CQJ0 248 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Serpinb3bQ9D1Q5 387 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Timm44O35857 452 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Sparcl1P70663 650 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Satb1Q60611 764 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tmem119Q8R138 280 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Kcnk13Q8R1P5 405 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Sh3bp1P55194 680 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 GnptabQ69ZN6 1235 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Sec23ipQ6NZC7 998 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Daam2Q80U19 1115 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tor4aQ8BH02 426 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Enox1Q8BHR2 643 aaKnown RBP9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rps6ka5Q8C050 863 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Csgalnact2Q8C1F4 542 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cep57Q8CEE0 500 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mcf2A2AEU1 1111 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ube4aE9Q735 1028 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mdh1bQ5F204 500 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Crybg3Q80W49 1005 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Hps4Q99KG7 671 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Lonrf3Q9D4H7 753 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Cul1Q9WTX6 776 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Abcc6Q9R1S7 1498 aa9.98□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ncoa3O09000 1398 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gimap9G3X987 291 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pgrmc1O55022 195 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 XlrP05531 208 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Stk38lQ7TSE6 464 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ehd2Q8BH64 543 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pcdhb12Q91Y07 789 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ciao1Q99KN2 339 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pstpip2Q99M15 334 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mrps25Q9D125 171 aaKnown RBP9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Slc13a1Q9JHI4 594 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Psmg1Q9JK23 289 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Arhgef10lA2AWP8 1280 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Wfs1P56695 890 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mphosph8Q3TYA6 858 aaKnown RBP9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Armc2Q3URY6 854 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tom1l2Q5SRX1 507 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Jade1Q6ZPI0 834 aaKnown RBP9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Fbxo11Q7TPD1 930 aaKnown RBP9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Palm2Q8BR92 376 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Dr1Q91WV0 176 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Pde6cQ91ZQ1 861 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rgs3Q9DC04 966 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mmrn2A6H6E2 943 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 PpargP37238 505 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Nsun2Q1HFZ0 757 aaKnown RBP9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Zfyve27Q3TXX3 415 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Kcna6Q61923 529 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 TrhQ62361 256 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Aggf1Q7TN31 711 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Bola2Q8BGS2 86 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rcn2Q8BP92 320 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Eps8l1Q8R5F8 716 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Rpap2Q8VC34 614 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Foxp3Q99JB6 429 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mroh8E9PYI4 1049 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Gm38392E9Q2A2 434 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Mapkapk5O54992 473 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Krt4P07744 525 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 EspnlQ3UYR4 1005 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Itih1Q61702 907 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Acad11Q80XL6 779 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Appl2Q8K3G9 662 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Grtp1Q9D3N8 359 aa9.97□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Map3k19E9Q3S4 1311 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 JrklB2RRL2 523 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Kif6E9PX57 802 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Tubgcp3P58854 905 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Kmt5aQ2YDW7 349 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Frmd8Q3UFK8 466 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ppp1r7Q3UM45 361 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Map3k12Q60700 888 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 HiraQ61666 1015 aa9.96□□□□□ -0.81
Ccdc47-201ENSMUST00000002043 Ano8Q6PB70 1060 aa9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms