RNA–Protein interactions for RNA: YML043C

RRN11, Transcript of Component of the core factor (CF) rDNA transcription factor complex, yeastyeast

Gene RRN11, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRN11YML043C ANR2P36090 516 aaPredicted RBP4.29□□□□□ -1.72
RRN11YML043C CAF4P36130 643 aa4.29□□□□□ -1.72
RRN11YML043C UTP30P36144 274 aaKnown RBP4.29□□□□□ -1.72
RRN11YML043C BMT2P38278 337 aa4.29□□□□□ -1.72
RRN11YML043C PAN5P38787 379 aa4.29□□□□□ -1.72
RRN11YML043C POP2P39008 433 aa4.29□□□□□ -1.72
RRN11YML043C SEN34P39707 275 aa4.29□□□□□ -1.72
RRN11YML043C AIM2P39721 246 aa4.29□□□□□ -1.72
RRN11YML043C SHQ1P40486 507 aaPredicted RBP4.29□□□□□ -1.72
RRN11YML043C UTP25P40498 721 aaKnown RBP4.29□□□□□ -1.72
RRN11YML043C PMT3P47190 753 aa4.29□□□□□ -1.72
RRN11YML043C FOL2P51601 243 aaKnown RBP4.29□□□□□ -1.72
RRN11YML043C MNT2P53059 558 aa4.29□□□□□ -1.72
RRN11YML043C RMR1P53060 241 aa4.29□□□□□ -1.72
RRN11YML043C GUP1P53154 560 aa4.29□□□□□ -1.72
RRN11YML043C SOL4P53315 255 aa4.29□□□□□ -1.72
RRN11YML043C DBP6P53734 629 aaKnown RBP4.29□□□□□ -1.72
RRN11YML043C ORC3P54790 616 aa4.29□□□□□ -1.72
RRN11YML043C LGE1Q02796 332 aaKnown RBP4.29□□□□□ -1.72
RRN11YML043C CLU1Q03690 1277 aaKnown RBP4.29□□□□□ -1.72
RRN11YML043C SSY1Q03770 852 aa4.29□□□□□ -1.72
RRN11YML043C YDR239CQ03780 787 aa4.29□□□□□ -1.72
RRN11YML043C DLT1Q04216 342 aa4.29□□□□□ -1.72
RRN11YML043C YDR286CQ05530 114 aa4.29□□□□□ -1.72
RRN11YML043C SPO77Q06134 477 aa4.29□□□□□ -1.72
RRN11YML043C YAP7Q08182 245 aa4.29□□□□□ -1.72
RRN11YML043C DSE3Q08729 430 aa4.29□□□□□ -1.72
RRN11YML043C HRK1Q08732 759 aaKnown RBP4.29□□□□□ -1.72
RRN11YML043C RAX1Q08760 435 aa4.29□□□□□ -1.72
RRN11YML043C ELG1Q12050 791 aa4.29□□□□□ -1.72
RRN11YML043C OSW2Q12202 724 aa4.29□□□□□ -1.72
RRN11YML043C FMP16Q12497 93 aa4.29□□□□□ -1.72
RRN11YML043C YBR298C-AQ8TGK4 73 aa4.29□□□□□ -1.72
RRN11YML043C APM4Q99186 491 aa4.29□□□□□ -1.72
RRN11YML043C YRF1-2P40105 1681 aa4.28□□□□□ -1.72
RRN11YML043C BI4P03879 638 aa4.28□□□□□ -1.72
RRN11YML043C GAL3P13045 520 aa4.28□□□□□ -1.72
RRN11YML043C TOP3P13099 656 aa4.28□□□□□ -1.72
RRN11YML043C POL3P15436 1097 aa4.28□□□□□ -1.72
RRN11YML043C OM45P16547 393 aa4.28□□□□□ -1.72
RRN11YML043C RIT1P23796 513 aa4.28□□□□□ -1.72
RRN11YML043C NAM9P27929 486 aa4.28□□□□□ -1.72
RRN11YML043C ICL1P28240 557 aaPredicted RBP4.28□□□□□ -1.72
RRN11YML043C NAM7P30771 971 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C PMT2P31382 759 aa4.28□□□□□ -1.72
RRN11YML043C NIC96P34077 839 aa4.28□□□□□ -1.72
RRN11YML043C YBL055CP34220 418 aaPredicted RBP4.28□□□□□ -1.72
RRN11YML043C YKT6P36015 200 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C RFT1P38206 574 aaPredicted RBP4.28□□□□□ -1.72
RRN11YML043C DED81P38707 554 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C HSE1P38753 452 aa4.28□□□□□ -1.72
RRN11YML043C YNG2P38806 282 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C FRT2P39734 528 aa4.28□□□□□ -1.72
RRN11YML043C IRC6P43615 237 aa4.28□□□□□ -1.72
RRN11YML043C UPF3P48412 387 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C RAI1P53063 387 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C YGL117WP53133 265 aa4.28□□□□□ -1.72
RRN11YML043C DAM1P53267 343 aa4.28□□□□□ -1.72
RRN11YML043C SOK2P53438 785 aaPredicted RBP4.28□□□□□ -1.72
RRN11YML043C CAF40P53829 373 aa4.28□□□□□ -1.72
RRN11YML043C ERG5P54781 538 aa4.28□□□□□ -1.72
RRN11YML043C SDH1Q00711 640 aa4.28□□□□□ -1.72
RRN11YML043C RPL6AQ02326 176 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C ERO1Q03103 563 aa4.28□□□□□ -1.72
RRN11YML043C BUL2Q03758 920 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C ATG16Q03818 150 aa4.28□□□□□ -1.72
RRN11YML043C SMP3Q04174 516 aa4.28□□□□□ -1.72
RRN11YML043C URC2Q04411 772 aa4.28□□□□□ -1.72
RRN11YML043C CRR1Q05790 422 aa4.28□□□□□ -1.72
RRN11YML043C VIP1Q06685 1146 aaKnown RBP4.28□□□□□ -1.72
RRN11YML043C SKI7Q08491 747 aaPredicted RBP4.28□□□□□ -1.72
RRN11YML043C MUM3Q08750 479 aa4.28□□□□□ -1.72
RRN11YML043C RCN2Q12044 265 aa4.28□□□□□ -1.72
RRN11YML043C TMA17Q12513 150 aa4.28□□□□□ -1.72
RRN11YML043C MDM12Q92328 271 aa4.28□□□□□ -1.72
RRN11YML043C YCL001W-BQ96VH2 84 aa4.28□□□□□ -1.72
RRN11YML043C MF(ALPHA)1P01149 165 aa4.27□□□□□ -1.73
RRN11YML043C CBP2P03874 630 aaPredicted RBP4.27□□□□□ -1.73
RRN11YML043C ATP4P05626 244 aa4.27□□□□□ -1.73
RRN11YML043C HSF1P10961 833 aa4.27□□□□□ -1.73
RRN11YML043C GFA1P14742 717 aaKnown RBP4.27□□□□□ -1.73
RRN11YML043C TRX1P22217 103 aaKnown RBP4.27□□□□□ -1.73
RRN11YML043C PRP28P23394 588 aa4.27□□□□□ -1.73
RRN11YML043C RPS5P26783 225 aaKnown RBP4.27□□□□□ -1.73
RRN11YML043C MCM4P30665 933 aaKnown RBP4.27□□□□□ -1.73
RRN11YML043C GCG1P32656 232 aaKnown RBP4.27□□□□□ -1.73
RRN11YML043C MTC2P34246 357 aa4.27□□□□□ -1.73
RRN11YML043C SPT10P35208 640 aa4.27□□□□□ -1.73
RRN11YML043C MRPL37P36532 105 aa4.27□□□□□ -1.73
RRN11YML043C SSO2P39926 295 aa4.27□□□□□ -1.73
RRN11YML043C SSP120P39931 234 aaKnown RBP4.27□□□□□ -1.73
RRN11YML043C YER184CP39961 794 aa4.27□□□□□ -1.73
RRN11YML043C YGR210CP42942 411 aa4.27□□□□□ -1.73
RRN11YML043C GUS1P46655 708 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
RRN11YML043C NMD5P46970 1048 aa4.27□□□□□ -1.73
RRN11YML043C PRP24P49960 444 aaKnown RBP4.27□□□□□ -1.73
RRN11YML043C YMR279CQ03263 540 aa4.27□□□□□ -1.73
RRN11YML043C NHP10Q03435 203 aa4.27□□□□□ -1.73
RRN11YML043C SPH1Q06160 661 aa4.27□□□□□ -1.73
RRN11YML043C YPR196WQ06595 470 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms