RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	ACP1	P32463	125 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	TIM23	P32897	222 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	RFS1	P38234	210 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	SLX1	P38324	304 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	SPF1	P39986	1215 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	PHO86	P46956	311 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	AIM23	P47015	356 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	KEL2	P50090	882 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	RBG2	P53295	368 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	CLU1	Q03690	1277 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	YMR155W	Q03795	547 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	APC4	Q04601	652 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	DXO1	Q06349	442 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	MLC2	Q06580	163 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	HRK1	Q08732	759 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	SAM4	Q08985	325 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	TY3A-G	Q12173	290 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	TY3A-I	Q99219	290 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	URA3	P03962	267 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	PCK1	P10963	549 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	PHO8	P11491	566 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	RED1	P14291	827 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	YCR015C	P25616	317 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	SKG6	P32900	734 aa	Predicted RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	CCT6	P39079	546 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	ALD5	P40047	520 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	MAF1	P41910	395 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	ROG3	P43602	733 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	SUT1	P53032	299 aa	Known RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	TPO2	P53283	614 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	MAK3	Q03503	176 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	HER2	Q03557	464 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	HSP31	Q04432	237 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	SSQ1	Q05931	657 aa	Predicted RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	SPH1	Q06160	661 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	BDS1	Q08347	646 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	ESA1	Q08649	445 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	ATP16	Q12165	160 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	ATG31	Q12421	196 aa		4.27	□□□□□ -1.73
UPC2	YDR213W	DCP1	Q12517	231 aa	Predicted RBP	4.27	□□□□□ -1.73
UPC2	YDR213W	TRP3	P00937	484 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ARG81	P05085	880 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	RHO2	P06781	192 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	BCY1	P07278	416 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	PET494	P07390	489 aa	Predicted RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	ERG20	P08524	352 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	SRD1	P09007	221 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ENA1	P13587	1091 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	KSS1	P14681	368 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	PRE8	P23639	250 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	YSP3	P25036	478 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	VMA8	P32610	256 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	GDH2	P33327	1092 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	ERT1	P38140	529 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ATG12	P38316	186 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	HXT6	P39003	570 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	HXT7	P39004	570 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	GIP4	P39732	760 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	PIC2	P40035	300 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	AGP3	P43548	558 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	HXT16	P47185	567 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	TAM41	P53230	385 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	LSB1	P53281	241 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ENA2	Q01896	1091 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	YPR196W	Q06595	470 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	MDM36	Q06820	579 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	PEX27	Q08580	376 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	HUA2	Q12134	243 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	KCS1	Q12494	1050 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ENA5	Q12691	1091 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	TPK2	P06245	380 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	HEM13	P11353	328 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	FBA1	P14540	359 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	CMP2	P14747	604 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
UPC2	YDR213W	PRI2	P20457	528 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	SRO9	P25567	434 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	RPS7A	P26786	190 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	PHA2	P32452	334 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	TMT1	P32643	299 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	SDH3	P33421	198 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	YKR075C	P36155	307 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	STV1	P37296	890 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ECM13	P38195	257 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	TOS1	P38288	455 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	RIM11	P38615	370 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	LEU5	P38702	357 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	RIM4	P38741	713 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	PAN5	P38787	379 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	BZZ1	P38822	633 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	CKB2	P38930	258 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	DDI1	P40087	428 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	DOT5	P40553	215 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ASN2	P49090	572 aa	Known RBP	4.26	□□□□□ -1.73
UPC2	YDR213W	ROD1	Q02805	837 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	TRS130	Q03660	1102 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	GSH2	Q08220	491 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	GSC2	P40989	1895 aa		4.26	□□□□□ -1.73
UPC2	YDR213W	ARG3	P05150	338 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	TPK3	P05986	398 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms