RNA–Protein interactions for RNA: ENST00000642122.1

ALK-207, Transcript of ALK receptor tyrosine kinase, humanhuman

BASIC

Gene ALK, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-207ENST00000642122 CALML3P27482 149 aa13□□□□□ -0.33
ALK-207ENST00000642122 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
ALK-207ENST00000642122 LRRC47Q8N1G4 583 aaKnown RBP13□□□□□ -0.33
ALK-207ENST00000642122 LRRC15Q8TF66 581 aa13□□□□□ -0.33
ALK-207ENST00000642122 PDCL3Q9H2J4 239 aa13□□□□□ -0.33
ALK-207ENST00000642122 BARHL2Q9NY43 387 aa13□□□□□ -0.33
ALK-207ENST00000642122 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
ALK-207ENST00000642122 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.99□□□□□ -0.33
ALK-207ENST00000642122 CTNND2Q9UQB3 1225 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 V9GYY5 206 aaPredicted RBP12.99□□□□□ -0.33
ALK-207ENST00000642122 MMP10P09238 476 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 TRAPPC10P48553 1259 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 CCDC112Q8NEF3 446 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 PIGSQ96S52 555 aa12.99□□□□□ -0.33
ALK-207ENST00000642122 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
ALK-207ENST00000642122 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 CTIFO43310 598 aaKnown RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 AKR1B1P15121 316 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 NAPAP54920 295 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 TMEM139Q8IV31 216 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 DACH1Q9UI36 760 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 ADAMTSL1Q8N6G6 1762 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 SRGNP10124 158 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 GNAQP50148 359 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 NCBP1Q09161 790 aaKnown RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 SYT10Q6XYQ8 523 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 SH3GLB2Q9NR46 395 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 TMEM260Q9NX78 707 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
ALK-207ENST00000642122 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
ALK-207ENST00000642122 LTBP1Q14766 1721 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 CACNB3P54284 484 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
ALK-207ENST00000642122 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
ALK-207ENST00000642122 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 PAXBP1Q9Y5B6 917 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 SMCO2A6NFE2 343 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 FANCGO15287 622 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 ERCC5P28715 1186 aaPredicted RBP12.97□□□□□ -0.33
ALK-207ENST00000642122 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
ALK-207ENST00000642122 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 RRAGBQ5VZM2 374 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 CREBRFQ8IUR6 639 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 TC2NQ8N9U0 490 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 TBC1D22AQ8WUA7 517 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 GSDMAQ96QA5 445 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 ZC3H12CQ9C0D7 883 aaKnown RBP12.97□□□□□ -0.33
ALK-207ENST00000642122 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 MYH1P12882 1939 aa12.97□□□□□ -0.33
ALK-207ENST00000642122 FAM196BA6NMK8 535 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.33
ALK-207ENST00000642122 PLCG2P16885 1265 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 STAT6P42226 847 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 NFIAQ12857 509 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 NR1I3Q14994 352 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 SPECC1LQ69YQ0 1117 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 DTHD1Q6ZMT9 781 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 ZFPM1Q8IX07 1006 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 LRRN4CLQ8ND94 238 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 RASSF8Q8NHQ8 419 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 CPLX3Q8WVH0 158 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 COA7Q96BR5 231 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
ALK-207ENST00000642122 BIN2Q9UBW5 565 aaPredicted RBP12.96□□□□□ -0.33
ALK-207ENST00000642122 CCNT1O60563 726 aaKnown RBP12.96□□□□□ -0.34
ALK-207ENST00000642122 PDHBP11177 359 aa12.96□□□□□ -0.34
ALK-207ENST00000642122 CCT6AP40227 531 aaKnown RBP12.96□□□□□ -0.34
ALK-207ENST00000642122 SPATA1Q5VX52 437 aa12.96□□□□□ -0.34
ALK-207ENST00000642122 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.34
ALK-207ENST00000642122 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.34
ALK-207ENST00000642122 SPZ1Q9BXG8 430 aa12.96□□□□□ -0.34
ALK-207ENST00000642122 DISC1Q9NRI5 854 aa12.96□□□□□ -0.34
ALK-207ENST00000642122 USP40Q9NVE5 1235 aa12.96□□□□□ -0.34
ALK-207ENST00000642122 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.34
ALK-207ENST00000642122 A0A1B0GTH6 734 aa12.95□□□□□ -0.34
ALK-207ENST00000642122 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
ALK-207ENST00000642122 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
ALK-207ENST00000642122 MTF1Q14872 753 aa12.95□□□□□ -0.34
ALK-207ENST00000642122 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
ALK-207ENST00000642122 ARL6IP4Q66PJ3 421 aaKnown RBP12.95□□□□□ -0.34
ALK-207ENST00000642122 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
ALK-207ENST00000642122 COA1Q9GZY4 146 aa12.95□□□□□ -0.34
ALK-207ENST00000642122 ZMYND12Q9H0C1 365 aa12.95□□□□□ -0.34
ALK-207ENST00000642122 KCND1Q9NSA2 647 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms